Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1g00092 ATGGCTTTCTCACCAGACTCTTCTCGCCGCAACTCCCTCATCCCTTCCTTCCTCTATTCTTCCTCTTCCTCCACCAAAACCCTACCCTTCCAGAAGATTCTCAACTCTCCCTCCTCTCCCGCCGGAAGCGGTGGCGCCTTCATGATTCCCTCTCCCAGCGAGCCCGGCAAGATCGAGATGTACTCACCGGCCTTCTACGCCGCCTGTACCGCCGGAGGTATCCTCAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTCGACCTCGTCAAGTGTAATATGCAGATTGACCCTACCAAGTACAAGAGTATCTCCTCTGGTTTTGGAGTTCTGATGAAGGAGCAGGGACTCAGGGGCTTCTTCAGGGGATGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGTGCTTGCAAGTTTGGATTTTATGAATTCTTCAAAAAGTACTACTCTGATTTGGCTGGTCCTGAATATGCATCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCATTCGAGGCTGTGAAGGTCCGTGTTCAAACTCAGCCCGGATTTGCTAGGGGTCTGGCTGATGGGTTACCCAAGTTTGTCAGATCTGAAGGAACTATGGGATTGTACAAGGGATTGGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCCTTTGAGACTATTGTGGAGATGATCTACAAACATGCCATCCCCACGCCAAAGAGTGAGTGCAGCAAGGGTCTGCAACTCGGTGTGAGTTTTGCTGGTGGATATGTTGCAGGTGTGTTCTGTGCCATTGTGTCACATCCAGCCGATAACCTTGTCTCTTTCCTTAACAATGCCAAGGGAGCAACAGTTGGTGATGCTGTGCAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACAGGAGCTCAATGGGGAATATATGATGCTTTCAAGGTCTTCGTGGGACTGCCAACCACCGGTGGTCCTGCTCCTGCTGCCGTTCCTACTCCTTCTGGTGCTGAGCTTGCAAAGGCTTAG 1101 0.5086 MAFSPDSSRRNSLIPSFLYSSSSSTKTLPFQKILNSPSSPAGSGGAFMIPSPSEPGKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPTKYKSISSGFGVLMKEQGLRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVRSEGTMGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPTPKSECSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAVPTPSGAELAKA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1g00092 366 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 47 352 IPR044677 GO:0005315|GO:1990547
Stsc1g00092 366 FunFam Phosphate carrier protein, mitochondrial 64 342 - -
Stsc1g00092 366 Pfam Mitochondrial carrier protein 67 150 IPR018108 -
Stsc1g00092 366 Pfam Mitochondrial carrier protein 163 249 IPR018108 -
Stsc1g00092 366 SUPERFAMILY Mitochondrial carrier 67 337 IPR023395 -
Stsc1g00092 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 161 245 IPR018108 -
Stsc1g00092 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 262 341 IPR018108 -
Stsc1g00092 366 Gene3D Mitochondrial carrier domain 64 342 IPR023395 -
Stsc1g00092 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 148 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1g00092 Stsc-Chr1 840050 842851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1g00092 7 353 Chloroplast and Mitochondria Gene Families AT5G14040 81.319 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1g00092 K15102 - gmx:548006 599.356