Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1g00077 GTGGAAGTTAAGGTAAGGGAAGGAAAAGCTGTCAACATTCATATGTTTTGTAGCCACCGACCAGGTCTTCTGCTCTCTACAATGCAGGCTCTGGATAACCTCGGATTAGATGTTCAGCAGGCTGTTATTAGCTGCTTCAATGGATTTGCTTTAGACATTTTCAAAGCCCAGCAATGCAGAGAAGGGCAGGATGTGCTACCTGAGGAAATCAAAGCAGTTCTGCTGAATTCAGCAGGTGTCCATGATATGATGTGA 255 0.4471 VEVKVREGKAVNIHMFCSHRPGLLLSTMQALDNLGLDVQQAVISCFNGFALDIFKAQQCREGQDVLPEEIKAVLLNSAGVHDMM 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1g00077 84 SUPERFAMILY ACT-like 9 83 IPR045865 -
Stsc1g00077 84 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1g00077 Stsc-Chr1 689317 689854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1g00077 1 57 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 82.456 8.25e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1g00077 - - aip:107619432 159.073