Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc19g00025 ATGTCGGCTTACAGAGAAGAGGACCCTCGTCTTCATGGCATCAAAACAAAGATTCGTGTCGTCCCACACTTTCCCAAATCCGGAATAATGTTCCAAGACATCACTACTCTCTTACTGGACCCCAAAGCCTTCAAGGATACCATCGATTTGTTCGTGGAGCGTTACAAAGGGAAAAACATTAATGTTGTTGCAGGAATTGAAGCTCGGGGTTTCATATTCGGTCCTCCCATAGCATTGGCAATAGGAGCAAAGTTTGTACCACTGAGGAAACCAAAGAAGTTACCTGGGAAAGTGATATCCCAAGAGTATATTCTGGAGTATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCAGTTGAAGCTGGTGAGCGCGCTTTAGTTGTTGATGATTTGATTGCAACTGGTGGAACACTCTGTGCTGCTATGGATTTACTCGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCCTGTGTAATAGAATTGCCAGAACTGAAGGGGCGTGAACGGTTGAATGGGAAGCCATTGTATGTGTTGGTGGAGTACTTGGAAGTCGCATCCAGTTCCTCATCCACTACGAGCTCGACCGATTCCGCTTTCTCGTATCCTTCGAAGACCTCAAATTTGGCTCCATGTGGATCCGCATCATGCCGTAATGCGCCCCAACGAGACCCACACCATCTTCGCCAAGTCAATGATGCTCCCGGTAGGCCGGGTAGCCTGCTCAGGCTCCTCATCAAGAAGTACCTTCTCGAGAGGAGAACCCTCATGCCTCACATGGCCACATTCTTGGATTCTATTGAGAAAATGCTACTACTAAAAAAGAAGAACAAGAAGTTAAATTCACCGAAATTGTGGAGGTTTGTTTTGACCAAAGGGGTGCCAAACACTAGGTGTGGTGGTGGCGGTTGTTGA 912 0.4748 MSAYREEDPRLHGIKTKIRVVPHFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNINVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYLEVASSSSSTTSSTDSAFSYPSKTSNLAPCGSASCRNAPQRDPHHLRQVNDAPGRPGSLLRLLIKKYLLERRTLMPHMATFLDSIEKMLLLKKKNKKLNSPKLWRFVLTKGVPNTRCGGGGC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc19g00025 303 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc19g00025 303 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Stsc19g00025 303 Gene3D - 2 181 IPR029057 -
Stsc19g00025 303 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc19g00025 303 MobiDBLite consensus disorder prediction 207 233 - -
Stsc19g00025 303 CDD PRTases_typeI 48 180 IPR000836 -
Stsc19g00025 303 Pfam Phosphoribosyl transferase domain 51 167 IPR000836 -
Stsc19g00025 303 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Stsc19g00025 303 SUPERFAMILY PRTase-like 13 175 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc19g00025 Stsc-Chr19 151597 155337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc19g00025 1 180 PRT Gene Family AT1G27450 73.889 1.53e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc19g00025 K00759 - gmx:100306411 353.214