Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc19g00013 ATGGCTGCAAGAGTAGTAAGATATGAGATTATTTTTGTATTAGCTCTCTTGCTGATAAGCTTTGTAAGTGAGACGGGTGGGACAACCACCCCACAAGAGTTCATAAAATCGTCATGCAGGGCAACACGCTACCCTGCTCGCTGTGTGGAATGCCTCATTGGCTACGCAGGAGTCATTGGCCAGAGCAAGAGGCAACTAGCCCTGGAGGCCTTATCAGTGAGCATATCAAGTACACGGTCGTGTTCATCGTTTGTGAAGAAGATGGCGAAGCAGATGAGGATGAAGCCACGGGAGTACGGAGCTGTACAGGACTGCATAGAAAACATGGGGGACAGCGTAGACAGGCTGAGCCAATCGGTGAGGGAGATGGGGCGCGTGGGTGAAGGAGTGGGAGAGGACTTTGAGTGGCACATGAGCAACGTGCAGACATGGGTCAGTGCTGCTCTCACTGACGACAACACATGTCTTGATGGCTTTGATGGCCGTGCCATGAATGGCAATGTCAAGGCAGCCATTAGAGGTAGGGTCCTCTATGTTGCTCAGCTCACAAGTAACGCCCTCGCTTTGGTTAATCACTTTGCTCAAACACACAGTACTACTCATCAAACTCCTCCGATCTTCAACTAA 627 0.504 MAARVVRYEIIFVLALLLISFVSETGGTTTPQEFIKSSCRATRYPARCVECLIGYAGVIGQSKRQLALEALSVSISSTRSCSSFVKKMAKQMRMKPREYGAVQDCIENMGDSVDRLSQSVREMGRVGEGVGEDFEWHMSNVQTWVSAALTDDNTCLDGFDGRAMNGNVKAAIRGRVLYVAQLTSNALALVNHFAQTHSTTHQTPPIFN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc19g00013 208 NCBIfam pectinesterase inhibitor domain 10 192 IPR006501 GO:0004857
Stsc19g00013 208 Pfam Plant invertase/pectin methylesterase inhibitor 34 189 IPR006501 GO:0004857
Stsc19g00013 208 CDD PMEI-like_3 37 194 - -
Stsc19g00013 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 189 - -
Stsc19g00013 208 SMART PMEI_2 30 189 IPR006501 GO:0004857
Stsc19g00013 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 193 IPR035513 -
Stsc19g00013 208 FunFam Pectin methylesterase inhibitor 1 30 193 - -
Stsc19g00013 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 194 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc19g00013 Stsc-Chr19 69567 70614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc19g00013 35 196 Carbohydrate Esterase AT3G14310 28.221 2.50e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc19g00013 - - mtr:11427094 248.054