Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1990g00001 ATGGATTCAGTTCTAACTTATCTTAGCACTTCTACAATGATCTTCTCTCTTATCATTATCATCTTGTCCTATTTATCATTATATCGTCCATTCAAAGTTGGCAATAATAAACCTAGAGAACCTCCTATGGTGGCTGGTGCTTGGCCTATACTCGGTCACCTTCCACTCTTCCATGGCTCACGTTCACAGCCACTCCACATAACTTTAGCCGCCATGGCCGACAAATACGGACCCGTTTTCACGGTGAAGCTTGGTTCCAAAAAGATCGTAGTACTAAGCAACTCAGAAATGGCTAAAGAATGCTTCACCAAGAATGACGCAGTTGCTTCCTCTCGTCCTAATCTGGTCTCATTTGAGAGGCTTGGCTACAACGGAGCCATGATTGGTTTCACGCCGTACAGTCCATACTGGCGTGAACTCCGCAAGTTTTCAAACTTAGAACTTCTCTCGAATCGCCGCATAGAGCTTCTAAGCCATGTTCGTGTCTCCGAAGTTCGAGCTTCAACAAAAGAGCTCCTGAATCTCTGGTCCACTCAGAAGGATGAATCTGGGTATGTGTTGGTGGACATAAAGCAATGGTTTGCGGAATTGACATTCAACATGGTTCTTAGAATGGTTGCGGGGAAGAGATTCTTTGGAGCCATGGATTCGGAGAGTGAGGAGAAAGCAAATAAATTTTTGAAGACTATGAGGGAGATGATGCGGCTTATGGGGCTGTTTACTGTGGGAGATGCAATTCCTTCTTTGAGGTTGTTGGATTTGGGGGGTCATGAGAAGGCCATGAAAAAAACTGCTGAGGAGCTTGATCTGATTTTGAGTGGTTGGTTAGATGAGCATCGCCAAAAGATTGGTTTGTTAGATGAAAAGGATTCAGGTGAAGAACGTGAACATGACTTCATTGATGTCATGCTTTCGGTGTTTTCTGATACCAAGATTGATGCATTTGATGCTGATACCATTTACAAAGCCACAATATTGGTATGTTTGTATGTTATAGAATTTGTTGC 1007 0.432 MDSVLTYLSTSTMIFSLIIIILSYLSLYRPFKVGNNKPREPPMVAGAWPILGHLPLFHGSRSQPLHITLAAMADKYGPVFTVKLGSKKIVVLSNSEMAKECFTKNDAVASSRPNLVSFERLGYNGAMIGFTPYSPYWRELRKFSNLELLSNRRIELLSHVRVSEVRASTKELLNLWSTQKDESGYVLVDIKQWFAELTFNMVLRMVAGKRFFGAMDSESEEKANKFLKTMREMMRLMGLFTVGDAIPSLRLLDLGGHEKAMKKTAEELDLILSGWLDEHRQKIGLLDEKDSGEEREHDFIDVMLSVFSDTKIDAFDADTIYKATILVCLYVIEFVA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1990g00001 336 Gene3D Cytochrome P450 32 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 Pfam Cytochrome P450 46 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 SUPERFAMILY Cytochrome P450 39 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1990g00001 336 PANTHER CYTOCHROME P450 82C3-RELATED 19 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1990g00001 Stsc-Chr1990 1290 2329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1990g00001 12 329 Cytochrome P450 AT4G31940 44.444 4.21e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1990g00001 - - adu:107490967 520.005