Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc197g00002 ATGGAAGAACATCTAACTCCATTGGCAGTTACACATCTTCTTCAACACACTCTAAGAAGCTTGTGCATCCATGACAATTCTCAGTGGGTCTATGCTGTCTTCTGGAGGATCCTCCCCAGAAACTACCCTCCACCAAAGTGGGAGGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATATTGGTGTGGGAAGATGGATTCTGCAACTTTGCAGCATCAGCAGCAGCACCTGAAATAAACTCTGGTGATTGTCCTAATAACAATAATAATAATAATAATGGTTCTTCTTCTTCATCTTCTTCTGTTTATGGCAACTGTGAGTTCCAACCCTACCAAGGCCTGCAACCAGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGGTTGATAGGGAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAGCCTAATGAACAAGAAATCAATTTCTTGTCAGCATGGCATAATTCAGCTGATTCACATCCTAGGACTTGGGAAGCACAGTTCCAATCTGGTATAAAGACCATAGCTCTAATTGCTGTAAGAGAAGGTGTTGTTCAATTAGGAGCAGTTCACAAGGTAATTGAGGATTTGAGCTATGTGGTTCTACTGAGGAAGAAATTCAGCTACATAGAAAGCATCCCAGGAGTTCTTCTACCACACCCTTCATCTTCTGCATACCCTTACAAAGTTGAAGGAGTGGTAGGTTATGGTGGTAATAATAATAACAACATTCTAGAACATCATCATCAATGGCATCATCATCATTTCCAAGGAACAATTATGCCTCCACCAACACCAACAACTGAATTGTTCTATGACCATCATCATCATTTCAATAGCAGCAACAACAGCAGCATGGCATTGAAGATAACTCCATCAATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTGCCTTCAGTTGTTCCACCACAATCACAATCACAAGAACAAAGGGCTTTGGAATTCATGGGAGGGATTCAGAAAGTTGTGGCTGCAAAAGAGGAGGAGCTTGATAATGATAATGATGATGAAGTTTATAGGCCTGAGCTTGATATTGGTGAGAGCAGTACTTCCATGCATCATCATCATCATCATCAGAACTATCATCATAATAATAATCAACACCATCATTTCCATCATCATCATAATAATAATAATAATAATAATGTAACTAGTAGTGGACCCAATAATAATAATGGATTCTGA 1242 0.3994 MEEHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINSGDCPNNNNNNNNGSSSSSSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNEQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGVVGYGGNNNNNILEHHHQWHHHHFQGTIMPPPTPTTELFYDHHHHFNSSNNSSMALKITPSMSSLEALLSKLPSVVPPQSQSQEQRALEFMGGIQKVVAAKEEELDNDNDDEVYRPELDIGESSTSMHHHHHHQNYHHNNNQHHHFHHHHNNNNNNNVTSSGPNNNNGF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc197g00002 413 MobiDBLite consensus disorder prediction 367 413 - -
Stsc197g00002 413 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 400 - -
Stsc197g00002 413 MobiDBLite consensus disorder prediction 374 395 - -
Stsc197g00002 413 MobiDBLite consensus disorder prediction 396 413 - -
Stsc197g00002 413 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 219 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc197g00002 Stsc-Chr197 40397 42408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc197g00002 125 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 41.667 1.24e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc197g00002 - - ahf:112750044 583.948