Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc196899g00001 ATGTATTTGGAGGCTACTACTAGGCATCTTAACGAATATGGAGAAAATGGTCTGAGAACACTTGCCCTTGCTTACAAAAGGCTTAATGAGCAAGAGTACACTGAGTGGAACAATGAGTTTCAGAAAGCCAGGACTTCTGTTGGGACTGACAGAGAGGCAATGCTTGAGGAGGTATCAGATCTTATGGAAAGAGA 194 0.4278 MYLEATTRHLNEYGENGLRTLALAYKRLNEQEYTEWNNEFQKARTSVGTDREAMLEEVSDLMER 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc196899g00001 64 Gene3D - 2 62 IPR023299 GO:0000166
Stsc196899g00001 64 Coils Coil 51 64 - -
Stsc196899g00001 64 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 64 - -
Stsc196899g00001 64 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 39 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc196899g00001 Stsc-Chr196899 16 209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc196899g00001 2 64 Primary Pumps ATPases AT3G13900 68.254 1.19e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc196899g00001 K01530 - ccaj:109805671 110.923