Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc1944g00001 | ATGGCAGCTACATTGCCCTCGAATCTCTTGGCAAGCCCTTCGAGTCCTGAATGGATGAACAAAGCCGACAATGCGTGGCAACTCGTGTCGGCGACACTTGTCGGCCTTCAAAGTGTTCCTGGACTCATAATCTTGTATGGAGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCCTTATATGCATTTGCATGTGTTTTCTTCTGTTGGATTGCATGGGGTTATAGAATGTCCTTCGGTGATAACCTTTTACCATTTTGGGGTAAAGCTGCTGTTGCACTTGATGAGAAGTACCTTCTTGACCCTGCATTTTCTGGGATGTTCCCAAATGCAACAATGGTGTATTTCCAGTGTGTGTTTGCAGCTATAACTCTGATTTTGATAGCAGGTGCTTTGTTGGGAAGAATGAACTTCTATGCATGGATGCTGTTTGTGCCTCTTTGGCTCACTTTCTCATACACTTTCACTGCATTCAGTATATGGAGTCCAAATGGATTCTTGTTCAAGCTAGGAATAATTGATTACTCTGGTGGATATGTTATTCATTTGTCTTCTGGTGTTGCTGGATTCACTGCTGCTTATTGGGTTGGGCCTCGGCTTAACAAGGACAGAGAAAGGTTCCCTCCAAACAACATCCTATTGATGTTGGCTGGGGCTGGCTTACTGTGGATGGGGTGGACCGGCTTCAATGGCGGTGACCCCTACTCAGTAGGCATAGATTCCTCCCTGGCCGTTTTGAACACTCATGCTTGCACTGCCACCAGCTTGCTCACTTGGGTCATTCTTGATGTCATCTTCTTCCGCAAACCCTCTGTTATTGGTGCTGTTCAAGGCATGATCACCGGCTTGGTCTGCATTACCCCTGCTGCAGGAGTTGTGCAAGGATGGGCAGCAATTCTAATGGGGATTCTATCTGGTTCAATTCCATGGTTCACAATGATGGTAGTTCACAAGAGATCAAAGCTTCTCCAAAAGGTGGATGACACAATGGCAGTGTTGCACACTCATGCCATTGCAGGAAGCCTTGGAGGAGTTCTCTCAGGCCTATTTGCTGTGCCAAAGCTCAACTTCTTATTCTATGGTAGTTACAACAAATATGTTGGACTCTTCTATGGCCTCCAAATGGGAATAGGCAGAACAGG | 1151 | 0.4613 | MAATLPSNLLASPSSPEWMNKADNAWQLVSATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWIAWGYRMSFGDNLLPFWGKAAVALDEKYLLDPAFSGMFPNATMVYFQCVFAAITLILIAGALLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPNGFLFKLGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVGIDSSLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAILMGILSGSIPWFTMMVVHKRSKLLQKVDDTMAVLHTHAIAGSLGGVLSGLFAVPKLNFLFYGSYNKYVGLFYGLQMGIGRTG | 384 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc1944g00001 | 384 | PANTHER | AMMONIUM TRANSPORTER MEP2 | 7 | 373 | IPR001905 | GO:0008519|GO:0016020|GO:0072488 | |
Stsc1944g00001 | 384 | SUPERFAMILY | Ammonium transporter | 18 | 374 | - | - | |
Stsc1944g00001 | 384 | ProSitePatterns | Ammonium transporters signature. | 177 | 202 | IPR018047 | GO:0008519|GO:0016020|GO:0072488 | |
Stsc1944g00001 | 384 | PRINTS | Rhesus blood group protein signature | 247 | 269 | IPR002229 | GO:0005886 | |
Stsc1944g00001 | 384 | PRINTS | Rhesus blood group protein signature | 344 | 360 | IPR002229 | GO:0005886 | |
Stsc1944g00001 | 384 | PRINTS | Rhesus blood group protein signature | 120 | 136 | IPR002229 | GO:0005886 | |
Stsc1944g00001 | 384 | PRINTS | Rhesus blood group protein signature | 216 | 234 | IPR002229 | GO:0005886 | |
Stsc1944g00001 | 384 | Pfam | Ammonium Transporter Family | 25 | 375 | IPR024041 | GO:0008519|GO:0016020|GO:0072488 | |
Stsc1944g00001 | 384 | Gene3D | Ammonium transporter AmtB like domains | 7 | 381 | IPR029020 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc1944g00001 | Stsc-Chr1944 | 1 | 1645 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc1944g00001 | 114 | 361 | Inorganic Solute Cotransporters | AT2G38290 | 69.758 | 3.36e-115 | 338 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc1944g00001 | K03320 | - | gmx:100787856 | 660.218 |