Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc194011g00001 ATGCTAGTCCTAACTGGATCAGGAAGCACAGCCATGACATTAACATGGTCACTATCATTACTCTTAAACCACCCAACAGCCATGAATGCTGCCAAACAAGAGTTAGATACTATCGTTGGAAAACACAATTGGGTCCAAGAGTCACACATCAAAGACCTCAAATATCTCCAAGCCATTGTCAAAGAGACTCTTCGCCTGTACCCACCCGCACCCTTGACCGGAATAAGGGAAGCCACCGAAGATTGCTATCTAAACGGTTACCATGTCTCGAAGGGAACTCGCTTGTTCATCAATCTATGGAAGCTCCATAGGGATCCCAAAACATGGTCTAATCCTAAT 339 0.4484 MLVLTGSGSTAMTLTWSLSLLLNHPTAMNAAKQELDTIVGKHNWVQESHIKDLKYLQAIVKETLRLYPPAPLTGIREATEDCYLNGYHVSKGTRLFINLWKLHRDPKTWSNPN 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc194011g00001 113 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 PANTHER CYTOCHROME P450 82C3-RELATED 2 113 - -
Stsc194011g00001 113 Gene3D Cytochrome P450 1 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 PRINTS E-class P450 group I signature 98 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 SUPERFAMILY Cytochrome P450 2 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc194011g00001 113 Pfam Cytochrome P450 5 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc194011g00001 Stsc-Chr194011 8 348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc194011g00001 2 113 Cytochrome P450 AT4G31940 54.464 1.10e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc194011g00001 K17961 - gmx:100787489 178.718