Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc193g00009 ATGGATCCGCCACCAACGCTGCCGCCGTCAATGCCACCACTTCCAACCACCATCGCTCCTTCCAGTGTCATGGCTGCTGCAGCCACTTCAATTCAAACAAACAACCCCGAATCGGTTGAATCCTCGCCGTGCTCTCGTATCGGTGAAGCATGGAATGATGAGCTTATTGCACCGGTTCCTGGCGCCAAGCTCCGCCTCATGTGCAGCTATGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATCGTGGTGGTGGATCGGAATTCGACTCTGAAGGACCTCTGTTTGAGGCTTTCCCGAACCTTATTGAATGGAAGACCCTTCACACTCAAGTACCAGTTACCAAATGAGGACCTTGACAATCTCATCTCTGTGGCCACAGATGAAGACCTTGACAACATGATTGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTCCCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCTTGTTCTTCTCCAAGCCAGAGACTACTGTTTCAATGGGATCACTTCTTGATGATGCCAAATCCGAGACATGGTTCGTTGATGCTCTCAACAACTCAGGGATCCTCACAAGGGGTGTGTCAGATTCTGCAGCAGGTGATTCCATTTTGAACCTTGATGGTGCTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCATGCTGCTGCGGCAGCAGAGTCTTTGGCTATGGCTGATAATATCACTGGAAACAATAACAGCAACTGCAGCAAGGTGAAGAATTTGCAGGATGTTGTAGCTGTGAATTCATTACCTGGCTCGCCTTCATCTGCTTCTTCTCCTTCAATGGCTAATCTCCCACCCATTCGGGTTCGTGTCGACGACAATGGTGCTAGTAGGCTTCAGCAGGAGCAGAGGGTTGGGGTGATGGAGGAGCAGTTTGCACAGATGACAATTGGTGCAAGTGGTGTGAGGCAAGATGAAGGGTTTGTTGTTGTTCCCTCTGCTGTGGCTATGCCTGCTGCAGTGCCTGCAGCTACTACTACAGCTTCAGCAGCAATGGTTACTAGCAATAGCAGTGATAACATGAATAGGTTTATATCTGATGATGAGAGATCAGATCCTGGGGTTCCTATTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTCTCAGTTTACCTTCTCCAGATTCAGTTACAAGCGACACTAGTAGCATTGCATCTACAAATTCTTTCACAAAGAATGTGTACTATCAAGAACAAGTGCAACCTTCACATGTTGATAACAAAGCTCCTACCTTAAGCAATGCCAAGATTGAAATCAGAGAACAAATTCAGGATCCTAACTACACATTACCTCCACAATTAGATCAAAACCAGCAACTCCACCAGCAATTTGTACAAGCAAGCAGCCCCTACATTCACCACCCTGCCGCCACTGGTACAGTGCCAATGTCATCTTACTACCCAGTTTACGCGCCGCCACCGCGGCTGCCATCACAGCCACAACTTCACCAGCATCCAATTCCTCAAACTCAACCACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAGCACAACATAGCTGATCCTAACATGGTAGCATCAGGTAGACCACTAGTACCCCAGAGTATTGCTGCTCCTCCTGCAGTGTCAACAACAACATACAAAGATGGGACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCAACAACCACTCAGGCATTTATTCAAATACCTTCTGGTCAGTTTCAGCAACAACCACAGTATGTGGGTTTGGCTCAGGTTCAGCACCATCAACCACCACCAACACAGCACATTGCTCTGGCTCCATCTGGTGGTAGTGGCGGTGCTACTAATTATGGTTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCCGCATACTACACACAACAGCAACAAGCTACTTCTGCTCCATTGGCTTCTCAGTACCAATCCATGACTCCGGCAGCGGCTGCGGCCGCGCTCTCGGATGCTTCGAAGCAATTCCCTAATGAGAATCTTCAGCAAAACAGAACTTCACAACCAGTATAG 2142 0.4832 MDPPPTLPPSMPPLPTTIAPSSVMAAAATSIQTNNPESVESSPCSRIGEAWNDELIAPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVATDEDLDNMIEEYDRVAAASASPLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGILTRGVSDSAAGDSILNLDGAGPAVSASGSSNNLEAHAAAAAESLAMADNITGNNNSNCSKVKNLQDVVAVNSLPGSPSSASSPSMANLPPIRVRVDDNGASRLQQEQRVGVMEEQFAQMTIGASGVRQDEGFVVVPSAVAMPAAVPAATTTASAAMVTSNSSDNMNRFISDDERSDPGVPIGFGKPPLPLQLVQPRTGGGLSLPSPDSVTSDTSSIASTNSFTKNVYYQEQVQPSHVDNKAPTLSNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAATGTVPMSSYYPVYAPPPRLPSQPQLHQHPIPQTQPQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRPLVPQSIAAPPAVSTTTYKDGTLPIYPPRPNTQPTTTQAFIQIPSGQFQQQPQYVGLAQVQHHQPPPTQHIALAPSGGSGGATNYGYEYGGGTVQDQAAYYTQQQQATSAPLASQYQSMTPAAAAAALSDASKQFPNENLQQNRTSQPV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc193g00009 713 PANTHER OS05G0427100 PROTEIN-RELATED 35 545 - -
Stsc193g00009 713 SUPERFAMILY CAD & PB1 domains 79 182 - -
Stsc193g00009 713 SMART PB1_new 78 171 IPR000270 GO:0005515
Stsc193g00009 713 MobiDBLite consensus disorder prediction 696 713 - -
Stsc193g00009 713 Pfam PB1 domain 79 171 IPR000270 GO:0005515
Stsc193g00009 713 CDD PB1_UP2 67 171 - -
Stsc193g00009 713 Gene3D - 84 172 - -
Stsc193g00009 713 MobiDBLite consensus disorder prediction 692 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc193g00009 Stsc-Chr193 70333 73176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc193g00009 63 200 MAP Kinase Kinase Kinase AT5G57610 43.571 1.42e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc193g00009 - - ahf:112751063 1058.51