Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc193752g00001 TCAATTGCATTCGAGAACACCGCCGGTGCCGAAGGTCACCAAGCAGTGGCTCTCCGCATCCAAGGTGACCGCTCAGCCTTCTTTGATTGCGCCATGCGCGGCTACCAAGACACACTTTATGCCCATGCTCATCGTCAGTATTACCGCAACTGCGAAATCTCCGGTACCATCGACTTCATCTTCGGCTATGGCACCACCTTGA 202 0.5446 SIAFENTAGAEGHQAVALRIQGDRSAFFDCAMRGYQDTLYAHAHRQYYRNCEISGTIDFIFGYGTTL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc193752g00001 67 ProSitePatterns Pectinesterase signature 2. 53 62 IPR033131 -
Stsc193752g00001 67 Pfam Pectinesterase 2 65 IPR000070 GO:0030599|GO:0042545
Stsc193752g00001 67 SUPERFAMILY Pectin lyase-like 2 66 IPR011050 -
Stsc193752g00001 67 PANTHER PECTINESTERASE 1 64 - -
Stsc193752g00001 67 Gene3D - 1 67 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc193752g00001 Stsc-Chr193752 125 326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc193752g00001 2 62 Carbohydrate Esterase AT4G15980 70.492 4.05e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc193752g00001 K01051 - gmx:100808559 137.117