Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc193053g00001 ATGGGAAAGAGGCAGGAAACTGTGGAGGATGTTCCTTGTGGTAACACAGTTGCCATGGTTGGTTTAGATCAATTTATCACCAAGAATGCCACATTGACAAATGAGAAGGAAGTGGATGCCCATCCCATCCGAGCCATGAAGTTTTCTGTCTCACCTGTTGTGCGTGTTGCTGTTCAGTGTAAGGTTGCATCTGATCTTCCTAAGCTTGTTGAAGGTCTCAAGAGGTTGGCCAAATCAGATCCTATGGTTCTCTGTACTATTGAGGAGTCTGGAGAGCACATTGTTGCTGGTGCCGGTGAGCTTCATTTAGAAATTTGCTTGAAGGACTTGCAAGAAGATTTCATGGGAGGAGCTGAGATCATCAAGTCTGACCCTGTTGTGTCTTTCCG 389 0.4576 MGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVLCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc193053g00001 130 Gene3D Elongation Factor G (Translational Gtpase), domain 3 50 128 - -
Stsc193053g00001 130 Gene3D Translation factors 1 49 - -
Stsc193053g00001 130 FunFam Translation elongation factor 2 51 128 - -
Stsc193053g00001 130 SUPERFAMILY EF-G C-terminal domain-like 49 125 IPR035647 -
Stsc193053g00001 130 Pfam Elongation Factor G, domain III 52 114 IPR041095 -
Stsc193053g00001 130 CDD EF2_snRNP_III 52 124 - -
Stsc193053g00001 130 SUPERFAMILY Translation proteins 1 42 IPR009000 -
Stsc193053g00001 130 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc193053g00001 Stsc-Chr193053 13 407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc193053g00001 1 130 Eukaryotic Initiation Factors Gene Family AT1G56070 97.692 2.63e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc193053g00001 K03234 - zju:107417973 257.684