Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc191g00005 ATGGGAAGTGGGGTAAATAACAAGTACCTTCCAGTGGTGGCTATGGTGATACTACAGTTCATATATGCAGGTATTGCCCTTGGAACAAGGACTGTCTTAGTAGGAGGAATGAGTCCAAGGGTCTTTGTTGTTTACCGCCAAGTTATGGCAACTCTTGTCATTCTTCCCGTTACTTATTTCTCTGGGAGAAACTCTGGCTTACGGTCCTTAAGTTTTAGGAGTTTTTGGCTCATATTCCTTGCCTCACTTATTGGCGTGACGTTGAATCAGAATCTATTATATGAGGGTCTATATCTGGTTTCCTCTTCAATTGCAAGTGCAATGGCCAATCTTCTCCCAGCTCTCACTTTTCTAATGGCAGCTCTTCTTAGAATGGAGAGTGTGAATATTGGAAGCTGGAGAGGTATAGCCAAAATAGTGGGGACAGTAACGTGTGTAAGTGGAGCATTCACCATGGCTTTGGTAAAGGGCACAAAGCTACTTAATAATGAACAAAAGCTTCCATCATCAAATTCACTCCTCATAGGTTTAGGTGGTGGTCCTGACAACACTTGGATTCTGGGTTGTCTCCTTCTCTTTGGAAGTAGTTTGTGCTGGTCACTTTGGCTCATTTTGCAGGTTCCAGCATCTGCAAGCCACCCTAATCACTTGTCTCTCTCAGCATGGATGTGTTTGATGGCAGCATTACAATCAGGAGCAGTCACACTATTCTTGGAGCCAAACCTTGCTGCTTGGAAGCTTCACTCTTTCTTTGAATTTGCTTCCACTGTATATGCTGGAGTTATGGGGTCTGCAGTGTCATTCTTTGTGCAAGCTTGGTGCATCTCAAGAAGAGGTCCTCTCTTCTCTGCAATGTTCACTCCCCTGTACACTGTCATAACCACCATATTGGCAGCCATAATTCTTCACGAGAGCCTATACACCGGAAGCTTGATAGGTGCAATTGGAGTGATAATTGGCTTGTATATTGTGCTGTGGGGTAAGGCTGAAGAAGTTGCTACTGTAAATGATGCTGAGGGGGTGACAGATCCAACACCAGCAGAAGTAGAAGAGGAAGTGAAAATCCACATAATAAATAATAATAATGAATCAACTGATTTTGAAGAACCCCTTCTCATAATCTCCAACTCACCTTCACATTTTTGA 1146 0.4319 MGSGVNNKYLPVVAMVILQFIYAGIALGTRTVLVGGMSPRVFVVYRQVMATLVILPVTYFSGRNSGLRSLSFRSFWLIFLASLIGVTLNQNLLYEGLYLVSSSIASAMANLLPALTFLMAALLRMESVNIGSWRGIAKIVGTVTCVSGAFTMALVKGTKLLNNEQKLPSSNSLLIGLGGGPDNTWILGCLLLFGSSLCWSLWLILQVPASASHPNHLSLSAWMCLMAALQSGAVTLFLEPNLAAWKLHSFFEFASTVYAGVMGSAVSFFVQAWCISRRGPLFSAMFTPLYTVITTILAAIILHESLYTGSLIGAIGVIIGLYIVLWGKAEEVATVNDAEGVTDPTPAEVEEEVKIHIINNNNESTDFEEPLLIISNSPSHF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc191g00005 381 Pfam EamA-like transporter family 12 146 IPR000620 GO:0016020
Stsc191g00005 381 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Stsc191g00005 381 PANTHER WAT1-RELATED PROTEIN 10 332 IPR030184 GO:0016020|GO:0022857
Stsc191g00005 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 146 - -
Stsc191g00005 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc191g00005 Stsc-Chr191 56005 58701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc191g00005 4 372 Nodulin-like Gene Family AT4G30420 53.209 3.32e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc191g00005 - - adu:107473294 595.504