Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc189g00005 ATGGGTAATGGAACTTCTCGCGTTTTTAGCTGTTTGGTGCCGTATAACGGCAAGAATGGGGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTAGGCCACTCTTTTTGTTATGTGAGGCCATCCATTTTCGAATCTCCTGCTATTACCCCATCGAATTCTGAGAGGTTTACACTAGATTCTAGCATCCTTGATTCGGAGACACTGAGTGGTTCGTTTAGGAATGATGGCATTGAAGATTCTTCTGCCACACACAAGCCAGTGAAGAACCTACCTGAAACCACATTCAAAACAATCTCAGGGGCTTCGGTCAGTGCCAATGTTTCGACTGCCAGGACCGGTAACCAGAATGCACTACTTGCTAGTAATTTCTTAGAACCTGCTGCCTCCTTTGAGGGAACTGCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTTTGAATGGCTTCATGTCTGGACCTTTGGAGAGGGGTTTTGCCTCTGGTCCTTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCAATGGAGAAGGGAGTTATGTCGGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCGGCACCGCTTGCTCGTGGTCGCCGAAGGCCTCACCTTCACCGCCTGATGAGAAGTTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTGCATGTTGTACTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCAATCTTTATAGATTTATAGACAAGGAATTAGAGGGATTGCTTTGGCATTATGAATATAATCCCGTTGATCCACTTGAACCTGAAGTCCATAAAGGAGAAAATGCAATGGTTCCTCCAGAATGCAAAGGAGAGGAAACGTTGGAAAGTTCTTGCTGTTTGGAAAATTCTTGTCCAGTTAAGGTCAAGGATCAATCATCTAACTGTGAGATAGTGGAGGAAAGCACTGACACTAAGGTGAATGCGAAACAGCTTAATTGTGGAAGTCCTAGTGTCTCCCGATTGGCTGGTCAAGGTAGAAAAAGCATGAAACTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAGGGTTTTTTGTCGGTCTCGGAGCAAGGTAAGGACTCTTCCATTGCTAGGGAAGTAACACAAGAAGATAGACCTAGACATCAGGATGAAGGCCCTACTACATCTGGAGAAAATGGAGGCATTGGGTTTAGTTCAACCAACCAGGTGCCTGTTGCTTCTTTTTCTGTTAAAGGACAAAGGCAGGATCCCAGAAAATCATATATCAGTATGAAAATCAGAAACATGTACAGGAAGCAGAAGTCCGTGCACAAAAATCTCTTTCCTTGGAATTATGATTGGCATAGGGAAGAAACCTGTGTTGACAAGAAAATAGTAGAAACCTTGAGGCCTATTAGAAAATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCACAAGCTCTTGAAAGAACAGAAGAAGCATACATAGACATGGTTGAGGATAATCTAGATAAAAATCCAGAGCTTGCCTTAATGGGATCCTGTGTTTTAGTGATGTTAATGAAGGATCAAGATGTTTATGTAATGAATGTTGGAGACAGCCGTGCAATTTTGGCACAAGAAAGACCAAATGATCGTCATCCCAATCCAAGCTTCATCAAGGATGACGTGAGGCATAGAAATCGATCTAGAGAGTCATTAGTTGGCATGGAGCTGGATAGGATTTCAGAGGAGTCTCCAATGCACAACATAAACTGCCGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGAAGTGCTTAGAATAAGAGCAGAACACCCAGAAGATAATCAAGCCATATTCAATGATAGAGTGAAAGGTCAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGCCATCTTTCAATGAACCTCTGCTGGAGAGGTTTCGAGTTGATTATGTGGGCAATACTCCTTACCTAAGTTGTGAATCTTCCGTCGTTCATCATCGGCTTTGCTCGAGTGATCGGTTCTTGGTACTATCCTCCGATGGGCTTTACCAATATTTCAGCAACGAAGAGGTAGTGGCCCATGTTACATGGTTCATGGAAAATGTCCCCGGTGGCGATCCGGCTCAATATCTTATCGCGGAGCTTCTTCTCCGTGCCGCCAAGAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTATCTGTAATGGTGGTTTCTTTGGAGGGAAGAATATGGAGATCATCGGGATAA 2361 0.4371 MGNGTSRVFSCLVPYNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTLDSSILDSETLSGSFRNDGIEDSSATHKPVKNLPETTFKTISGASVSANVSTARTGNQNALLASNFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPHLHRLMRSWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFIDKELEGLLWHYEYNPVDPLEPEVHKGENAMVPPECKGEETLESSCCLENSCPVKVKDQSSNCEIVEESTDTKVNAKQLNCGSPSVSRLAGQGRKSMKLYELLQMESWDEQGFLSVSEQGKDSSIAREVTQEDRPRHQDEGPTTSGENGGIGFSSTNQVPVASFSVKGQRQDPRKSYISMKIRNMYRKQKSVHKNLFPWNYDWHREETCVDKKIVETLRPIRKCKSGVDHNAVLRAMAQALERTEEAYIDMVEDNLDKNPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERPNDRHPNPSFIKDDVRHRNRSRESLVGMELDRISEESPMHNINCRLNMMNKNREISLCGLKMRAEVLRIRAEHPEDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLERFRVDYVGNTPYLSCESSVVHHRLCSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPGGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc189g00005 786 Gene3D - 192 347 IPR036457 -
Stsc189g00005 786 Gene3D - 439 783 IPR036457 -
Stsc189g00005 786 PANTHER PROTEIN PHOSPHATASE 2C 199 776 IPR015655 GO:0004722|GO:0006470
Stsc189g00005 786 MobiDBLite consensus disorder prediction 379 416 - -
Stsc189g00005 786 Pfam Protein phosphatase 2C 621 749 IPR001932 -
Stsc189g00005 786 Pfam Protein phosphatase 2C 502 559 IPR001932 -
Stsc189g00005 786 CDD PP2Cc 496 777 IPR001932 -
Stsc189g00005 786 SUPERFAMILY PP2C-like 221 778 IPR036457 -
Stsc189g00005 786 ProSiteProfiles PPM-type phosphatase domain profile. 209 777 IPR001932 -
Stsc189g00005 786 SMART PP2C_4 209 775 IPR001932 -
Stsc189g00005 786 MobiDBLite consensus disorder prediction 388 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc189g00005 Stsc-Chr189 18181 22617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc189g00005 1 786 PP2C-type Phosphatase Gene Family AT2G46920 60.529 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc189g00005 - - gmx:100786856 1200.27