Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc189g00004 ATGGGTAATGGAACTTCTCGCGTTTTTAGCTGTTTGGTGCCGTATAACGGCAAGAATGGGGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTAGGCCACTCTTTTTGTTATGTGAGGCCATCCATTTTCGAATCTCCTGCTATTACCCCATCGAATTCTGAGAGGTTTACACTAGATTCTAGCATCCTTGATTCGGAGACACTGAGTGGTTCGTTTAGGAATGATGGCATTGAAGATTCTTCTGCCACACACAAGCCAGTGAAGAACCTACCTGAAACCACATTCAAAACAATCTCAGGGGCTTCGGTCAGTGCCAATGTTTCGACTGCCAGGACCGGTAACCAGAATGCACTACTTGCTAGTAATTTCTTAGAACCTGCTGCCTCCTTTGAGGGAACTGCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTTTGAATGGCTTCATGTCTGGACCTTTGGAGAGGGGTTTTGCCTCTGGTCCTTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCAATGGAGAAGGGAGTTATGTCGGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCGGCACCGCTTGCTCGTGGTCGCCGAAGGCCTCACCTTCACCGCCTGATGAGAAGTTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTGCATGTTGTACTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCAATCTTTATAGATTTATAGACAAGGAATTAGAGGGATTGCTTTGGCATTATGAATATAATCCCGTTGATCCACTTGAACCTGAAGTCCATAAAGGAGAAAATGCAATGGTTCCTCCAGAATGCAAAGGAGAGGAAACGTTGGAAAGTTCTTGCTGTTTGGAAAATTCTTGTCCAGTTAAGGTCAAGGATCAATCATCTAACTGTGAGATAGTGGAGGAAAGCACTGACACTAAGGTGAATGCGAAACAGCTTAATTGTGGAAGTCCTAGTGTCTCCCGATTGGCTGGTCAAGGTAGAAAAAGCATGAAACTTTATGAGCTACTTCAGATGGAATCTTGGGATGAACAGGGTTTTTTGTCGGTCTCGGAGCAAGGTAAGGACTCTTCCATTGCTAGGGAAGTAACACAAGAAGATAGACCTAGACATCAGGATGAAGGCCCTACTACATCTGGAGAAAATGGAGGCATTGGGTTTAGTTCAACCAACCAGGTGCCTGTTGCTTCTTTTTCTGTTAAAGGACAAAGGCAGGATCCCAGAAAATCATATATCAGTATGAAAATCAGAAACATGTACAGGAAGCAGAAGTCCGTGCACAAAAATCTCTTTCCTTGGAATTATGATTGGCATAGGGAAGAAACCTGTGTTGACAAGAAAATAGTAGAAACCTTGAGGCCTATTAGAAAATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCACAAGCTCTTGAAAGAACAGAAGAAGCATACATAGACATGGTTGAGGATAATCTAGATAAAAATCCAGAGCTTGCCTTAATGGGATCCTGTGTTTTAGTGATGTTAATGAAGGATCAAGATGTTTATGTAATGAATGTTGGAGACAGCCGTGCAATTTTGGCACAAGAAAGACCAAATGATCGTCATCCCAATCCAAGCTTCATCAAGGATGACGTGAGGCATAGAAATCGATCTAGAGAGTCATTAGTTGGCATGGAGCTGGATAGGATTTCAGAGGAGTCTCCAATGCACAACATAAACTGCCGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGAAGTGCTTAGAATAAGAGCAGAACACCCAGAAGATAATCAAGCCATATTCAATGATAGAGTGAAAGGTCAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGGTCAGTTGA 1989 0.4349 MGNGTSRVFSCLVPYNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTLDSSILDSETLSGSFRNDGIEDSSATHKPVKNLPETTFKTISGASVSANVSTARTGNQNALLASNFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPHLHRLMRSWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFIDKELEGLLWHYEYNPVDPLEPEVHKGENAMVPPECKGEETLESSCCLENSCPVKVKDQSSNCEIVEESTDTKVNAKQLNCGSPSVSRLAGQGRKSMKLYELLQMESWDEQGFLSVSEQGKDSSIAREVTQEDRPRHQDEGPTTSGENGGIGFSSTNQVPVASFSVKGQRQDPRKSYISMKIRNMYRKQKSVHKNLFPWNYDWHREETCVDKKIVETLRPIRKCKSGVDHNAVLRAMAQALERTEEAYIDMVEDNLDKNPELALMGSCVLVMLMKDQDVYVMNVGDSRAILAQERPNDRHPNPSFIKDDVRHRNRSRESLVGMELDRISEESPMHNINCRLNMMNKNREISLCGLKMRAEVLRIRAEHPEDNQAIFNDRVKGQLKVTRAFGAGFLKRVS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc189g00004 662 Pfam Protein phosphatase 2C 502 559 IPR001932 -
Stsc189g00004 662 Gene3D - 192 349 IPR036457 -
Stsc189g00004 662 Gene3D - 432 662 IPR036457 -
Stsc189g00004 662 SUPERFAMILY PP2C-like 221 659 IPR036457 -
Stsc189g00004 662 MobiDBLite consensus disorder prediction 379 416 - -
Stsc189g00004 662 ProSiteProfiles PPM-type phosphatase domain profile. 209 662 IPR001932 -
Stsc189g00004 662 MobiDBLite consensus disorder prediction 388 404 - -
Stsc189g00004 662 SMART PP2C_4 209 661 IPR001932 -
Stsc189g00004 662 PANTHER PROTEIN PHOSPHATASE 2C 197 659 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc189g00004 Stsc-Chr189 18181 22617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc189g00004 1 660 PP2C-type Phosphatase Gene Family AT2G46920 56.931 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc189g00004 - - gmx:100786856 961.444