Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc189924g00001 ATGTTTCTTGACATAGCATGCTTCTTCAATGGGAAGAAATGGGAATATGTAAAAAAGGTATTAGACGGATGTGGTATGTTTACGGAAGATGGTATTAGAATACTAGTTGATAAGTCTCTCGTAAATATCAAAGACGGTTACTTGAGGATGCATGATCTAATACAGAATATGGGTAGAGAAATTGTGAAGCAGGAGGCACCAAAAGAAGTTAGTGAACGCAGCAGATTATGGTTTCATGAGGATGTTCTTGAGCTACTAAGCGAAGATATA 270 0.3704 MFLDIACFFNGKKWEYVKKVLDGCGMFTEDGIRILVDKSLVNIKDGYLRMHDLIQNMGREIVKQEAPKEVSERSRLWFHEDVLELLSEDI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc189924g00001 90 SUPERFAMILY "Winged helix" DNA-binding domain 2 86 IPR036390 -
Stsc189924g00001 90 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 83 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc189924g00001 Stsc-Chr189924 87 356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc189924g00001 1 77 WRKY Transcription Factor Family AT5G45050 51.948 2.74e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc189924g00001 - - ahf:112771910 173.711