Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc187608g00001 ATGGCGGGGGAGTTAGTGGAATTTGAGGAGGGTACCATAGGGATTGCTTTAAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGCTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCTTGGCTAAACCAATTGACGGTCGAGGAGAAATTTCATCTTCCGAATCTCGATTAATCGAATCTCCAGCTCCCGGCATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATTCAATGATCCCTATAGGGCGTGGTCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAGACAGCAGTAGCTACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCCTCTGTGGCTCAAGTGGTGACCACTTTACAAGAAAGGGGAGCAATGGAATACACTATTATAGTAGCTGAAACTGCGGATTCTCCAGCTACATTACAATATCTCGCTCCGTATACGGGAGCAGCTCTGGC 596 0.4228 MAGELVEFEEGTIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETADSPATLQYLAPYTGAALA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc187608g00001 199 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 199 IPR005294 GO:0015986|GO:0045261|GO:0046933
Stsc187608g00001 199 Gene3D - 48 199 IPR027417 -
Stsc187608g00001 199 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 102 199 IPR000194 GO:0005524
Stsc187608g00001 199 Gene3D - 1 47 IPR023366 -
Stsc187608g00001 199 Pfam ATP synthase alpha/beta family, beta-barrel domain 1 45 IPR004100 GO:0046034|GO:1902600
Stsc187608g00001 199 FunFam ATP synthase subunit alpha, mitochondrial 47 199 - -
Stsc187608g00001 199 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 1 47 IPR036121 GO:0046034|GO:1902600
Stsc187608g00001 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc187608g00001 Stsc-Chr187608 575 1170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc187608g00001 39 192 Primary Pumps ATPases(2) AT4G38510 27.059 1.87e-09 54.7