Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc186g00004 ATGGCGGGGAAACCTCTCACCGGATTTTGCTTCATCCTCCTCCTTCTGTTTGTTGCTCAGGAAATGGTGGTGCAAAGTGAGGCAGCAACATGTGAGAACCTGGCGGATACGTACAGGGGACCATGCTTCACCACCGGAAGCTGCGACGACCACTGCAAGAACAAGGAACACCTCCTGAGCGGCCGCTGCCGCGACGATTACCGGTGTTGGTGCACCAGAAACTGTTAA 228 0.5526 MAGKPLTGFCFILLLLFVAQEMVVQSEAATCENLADTYRGPCFTTGSCDDHCKNKEHLLSGRCRDDYRCWCTRNC 75
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc186g00004 75 SMART gth_4 30 75 IPR003614 GO:0006952
Stsc186g00004 75 Gene3D - 29 75 IPR036574 -
Stsc186g00004 75 Pfam Gamma-thionin family 30 75 - -
Stsc186g00004 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Stsc186g00004 75 SUPERFAMILY Scorpion toxin-like 30 75 IPR036574 -
Stsc186g00004 75 PANTHER DEFENSIN-LIKE PROTEIN 1 9 72 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc186g00004 Stsc-Chr186 13086 14005 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc186g00004 11 75 Plant Defensins Gene Families AT2G02130 40.299 2.23e-10 49.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc186g00004 - - gmx:100779239 143.665