Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc186925g00001 ATGATGCAGTGTGAGATTCTTGAATCTCCATCTTCCTTCTCTGCTTATCCTTGTTATTATGGATTGAGCACCATGGATGAAGATGATTGTGGATTCAGTTCCATATTCAACAACACTGAATTTGATGATCATATTCAATACACAATTGGTGATGAAACCTTGCAACTCCAACCCTTGATTCCTGATTTCCAAATGGAATTTCTTGAGAGTGAAGGAAGCATCGTCCCTTCACAAGAAGCATATAGTCCCACCCAATCATTCACTTCAGAGTTGTCATCATCAGTAACTCAACAACCATGGATGATACCACTCAACTTGCCACAACCAAACATGCAAATTGAAAACCACTTGATCCTTCCTCACATGCTGGAAGCCATTGGAGAGGCCTCGGAGAATGGACACAGACCTCTTGCTGAAGAGATCTTGAGATGCATCAACAACAAACTTAGCCCTCTCTCCCAAACCGTTGATGATCGCCTCCACTTTTACATGTCGCTACCGGCGGCCGGCGACCAGGGAGACTATTTGAAAGGGGAAGCCTTGAAGAACTCTGAGGGTGCTTTCAGGGCATTCTATGAAGCCACCCCTTTTGGCAAATTCGCTCACTTTGCGGCTCTCTCAGCAATCCTTGAAAGCATGCCTCTACACTGTGATTCCGTACATGTGGTGGACTCTGACATGGGAATTGGGATTCAATGGATTCCATTGATTCATGCCTTGGCTCAGAGGAACATCAAAATCATGAAACTGACATCCATCAGTATGGGAGGTCATCAGCAAGGGCTTTATGGTAATTCCACTGCTCCTTGTATTTCTGAGGAAACTAAGAGGCATCTCTATGAGCATGCAACATCTTGTGGCTTGAATCTCAAGGTGGAGGAAAAGAGAATTGAGGAACTTGTTTCTGAGTTCAAGAATTTTCAGCCAAGAGGTGGCATTGGCATGAGAGAGTTCTTGGCCTTCAATTGCATGCTTAACCTTCCACATATGGCCAAAAGAAGCTGTAGAAAACAAGCCTTGGAATTTCTGAGGTTGGCTAAGGATTTGATCAATTGCTCTGGGAACAAAGGAATCATCACTTTTGGTGATGGTGATGCATCTCAGAAACTCAACAGCAGCATGGATTTCAAGTCATTTTTTTATGGTCATTTGGTGCATTACCATGCCTTATTGGAATCAATTGAGTCAAGTTTTCCAATTAATTTCTCAGAGGCAAGGACTCTCATGGAGTCCCTGTTTGTGGCACCTTTTGTCTCTCCTTTTTCTTGGTTACAAACTTGGGAAGAGATGGAAAGGGATTCTTGCCATGTTCATGGGGATATTGATATTGGACTAGAAGGTTGCAGATTGAGCACAGGTATTTTAATGGAAGTAAGAGAAATGTTAAGTGGTAATGGAGGTTCATATGAGACAATGATTGAAGGGCAAAATGGGAATGAAATTGTTTTGGCATGGAAAGGAACAGAATTAGTGAGAGTTTCTGCTTGGACAAACTAA 1497 0.4262 MMQCEILESPSSFSAYPCYYGLSTMDEDDCGFSSIFNNTEFDDHIQYTIGDETLQLQPLIPDFQMEFLESEGSIVPSQEAYSPTQSFTSELSSSVTQQPWMIPLNLPQPNMQIENHLILPHMLEAIGEASENGHRPLAEEILRCINNKLSPLSQTVDDRLHFYMSLPAAGDQGDYLKGEALKNSEGAFRAFYEATPFGKFAHFAALSAILESMPLHCDSVHVVDSDMGIGIQWIPLIHALAQRNIKIMKLTSISMGGHQQGLYGNSTAPCISEETKRHLYEHATSCGLNLKVEEKRIEELVSEFKNFQPRGGIGMREFLAFNCMLNLPHMAKRSCRKQALEFLRLAKDLINCSGNKGIITFGDGDASQKLNSSMDFKSFFYGHLVHYHALLESIESSFPINFSEARTLMESLFVAPFVSPFSWLQTWEEMERDSCHVHGDIDIGLEGCRLSTGILMEVREMLSGNGGSYETMIEGQNGNEIVLAWKGTELVRVSAWTN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc186925g00001 498 ProSiteProfiles GRAS family profile. 110 497 IPR005202 -
Stsc186925g00001 498 Pfam GRAS domain family 182 497 IPR005202 -
Stsc186925g00001 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 490 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc186925g00001 Stsc-Chr186925 29 1525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc186925g00001 186 496 GRAS Transcription Factor Family AT3G60630 26.415 1.49e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc186925g00001 GRAS 1.8e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc186925g00001 - - adu:107485006 742.265