Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc186080g00002 ATGAGGATGTTTTCTAAGAAGGGAGGCCAAGATCTTTACATAAGAGTCCCTGGTTCAGAAGTAGCAGCCTCTAATAGCCATGGGAACATAAATAATAATAAGGTTGGAATCATAGTAGGTGTGGTTATTTTAGGAATAATCGCATTCGCCAGCACGATGATGATAATTAAAAATAGAGGTGTAGTAGCAAGAAATATATGCAAAAATAAGCTAAGTCAGGAAGATGTGGACCTACCAATATTCGATTTTTCAGTCATAGCTAAAGCTACAGGAAACTTTGCAAACAATAAAAAACTTGGAGAAGGTGGTTTTGGACCGGTCTATAAGGGCATACTTGAAGATGGCCGAGAATTAGCTGTGAAAAGGCTTTCGGAAAGGTCTAGACAAGGGCAAGAAGAGTTCAAAAATGAAGTGGTGTTGATAGCTAAACTTCAACATCGTAATCTTGTGAAACTTCTTGGTTGTTGTATTCAAGATGAAGAAAAAATATTGATTTATGAGTACATGCCTAACAAAAGCTTAGACCACTTTATTTCCGATGAAAGTAGACGGAAGTTGCTAGATTGGCTAAAGCGTTTTAACATTATCAATGGCATTGCTCGAGGACTTTTTTATCTTCATCAAGATTCTATATTGAGGATAATTCATAGAGATCTAAAAACCAGCAATATTTTGTTAGATGCGAATTTTAATCCCAAGATATCAGATTTTGGTTTAGCTCGAACTTTCTTAGATGATCAAGTTGAGGGAAACACAAATAAGATTGCTGGAACATAG 777 0.3591 MRMFSKKGGQDLYIRVPGSEVAASNSHGNINNNKVGIIVGVVILGIIAFASTMMIIKNRGVVARNICKNKLSQEDVDLPIFDFSVIAKATGNFANNKKLGEGGFGPVYKGILEDGRELAVKRLSERSRQGQEEFKNEVVLIAKLQHRNLVKLLGCCIQDEEKILIYEYMPNKSLDHFISDESRRKLLDWLKRFNIINGIARGLFYLHQDSILRIIHRDLKTSNILLDANFNPKISDFGLARTFLDDQVEGNTNKIAGT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc186080g00002 258 SMART serkin_6 93 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc186080g00002 258 SUPERFAMILY Protein kinase-like (PK-like) 78 258 IPR011009 -
Stsc186080g00002 258 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 258 - -
Stsc186080g00002 258 Gene3D Transferase(Phosphotransferase) domain 1 169 258 - -
Stsc186080g00002 258 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 169 258 - -
Stsc186080g00002 258 Gene3D Phosphorylase Kinase; domain 1 55 168 - -
Stsc186080g00002 258 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 57 168 - -
Stsc186080g00002 258 ProSiteProfiles Protein kinase domain profile. 93 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc186080g00002 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Stsc186080g00002 258 Pfam Protein kinase domain 94 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc186080g00002 Stsc-Chr186080 2 2075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc186080g00002 23 258 Receptor kinase-like Gene Family AT4G23190 50.820 2.92e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc186080g00002 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc186080g00002 - - adu:107464241 335.88