Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc186003g00001 ATGCTTCCACTTCCACCAGGACCTTCCCTATTTACCATGTTAGCAAACCTCTTTGAATTCATAAGAAAGCCACAACAAACATTGGCCAAGATTGCTAAGCTTTATGCCCCGGACATAATGCTTTTGAAGCTTGGCCAATCAACCACTGTAATAATATCTTCCCCAAACATTGCCAAAGAAATTCTCCAAACCAATGATTTGTTGTTTTCGGATCGAACCGTTCCGAGTATTGTAACTTCATTGGATCACCACAATTATAGCTTGCCCTTTCTTCCGATATGTCCTCTTTGGAGAGACTTCAGGAGAATATGCAATGATCAATTATTCGCTAACAAGACTCTTGATGCGAGTCAAGGTCTTAGGCGTAAGAAGCTTCAAGATCTTCTTAATGACATGCGAAAATATGGTCTGACCGGCCAAGCCGTTGATGTAGGGCATGCGGCTTTTAGGGCATGCATAAATTTCTTGTCCTATACTTTTGTGTCTGAGGATTTTGTTGATTCCGTAGAGAATGGAGAGTATAAGGACATTGTTTCCACTCTCTTGAAACTAACAGGAGCAACTAATGTGGTTGATATTTTCCCATTTTTAAAGGTTTTTGATCCTCAAGGTCTCCACAGGCACACTATTGATTACCTTACCAAGTTTTTTCATAGCTTGGACAAGTTGATTGACAAAAGGTTGAAACTAAGAGAAGAACAAGATTATGTCACAAACAATGACATGTTGGATACACTACTTGACATTTCTCAAGAAGATAGCCAAAAGATGGACAGAAGAAAGATCAGACACTTTTTGCTT 801 0.3933 MLPLPPGPSLFTMLANLFEFIRKPQQTLAKIAKLYAPDIMLLKLGQSTTVIISSPNIAKEILQTNDLLFSDRTVPSIVTSLDHHNYSLPFLPICPLWRDFRRICNDQLFANKTLDASQGLRRKKLQDLLNDMRKYGLTGQAVDVGHAAFRACINFLSYTFVSEDFVDSVENGEYKDIVSTLLKLTGATNVVDIFPFLKVFDPQGLHRHTIDYLTKFFHSLDKLIDKRLKLREEQDYVTNNDMLDTLLDISQEDSQKMDRRKIRHFLL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc186003g00001 267 Gene3D Cytochrome P450 1 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc186003g00001 267 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 267 - -
Stsc186003g00001 267 SUPERFAMILY Cytochrome P450 2 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc186003g00001 267 Pfam Cytochrome P450 5 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc186003g00001 Stsc-Chr186003 311 1111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc186003g00001 5 267 Cytochrome P450 AT3G61040 34.586 2.62e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc186003g00001 - - aip:107612182 420.624