Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184g00002 ATGGCTCCTAAAAGAGGTGGAAAAGCGCCAGTTCCGGCTTCGAAGAAGAAGCCTGAGAAGGTTACGAACCCTTTGTTCGAGAAACGTCCCAAGCAGTTTGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTTTCGTGAAGTGGCCTAAGACCGTACAAATCCAGAGGAAGAAGAGGATCCTCAAGCAGAGATTGAAGGTTCCACCTGCTTTGAACCAGTTCACTAAAACCCTTGACAAGAACCTCGCAACCAGCCTTTTCAAGATACTTCTGAAGTACAGGCCAGAGGATAAAGCTGAAAAGAAGGAGCGACTTTTGAAAAGGGCCCAGGCCGAGACCGAGGGCAAAACCGTTGAAGCTAAGAAGCCTATTGTTGTGAAATATGGTCTCAATCATGTCACCTACCTTATTGAGCAGGTTGTGTTCTCTTTTGACATGGATTAA 453 0.4724 MAPKRGGKAPVPASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVEAKKPIVVKYGLNHVTYLIEQVVFSFDMD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184g00002 150 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Stsc184g00002 150 PRINTS Ribosomal protein L7A family signature 125 145 IPR001921 -
Stsc184g00002 150 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Stsc184g00002 150 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Stsc184g00002 150 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Stsc184g00002 150 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 43 146 - -
Stsc184g00002 150 Gene3D - 51 144 IPR029064 -
Stsc184g00002 150 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184g00002 Stsc-Chr184 8805 9951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184g00002 1 150 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 79.355 8.67e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184g00002 K02936 - gmx:100792324 269.24