Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1849g00001 ATGGTGGTTGCTTCTTCTTCTTCTACTTCATCAAAGGCCCCTAAAGATGGGTGGAGGGCAATAATGTCATTCACCCACCAAGTAATCACAGGCCGTTGGTTCATGGTATTCGCCTCACTTCTAATCATGGCCGTTGCGGGTGCAACCTACATGTTCGGCTTATACTCCAACGACATAAAAACCTCACTAGGATATGACCAATCTACCCTCAACATGCTAAGCTTCTTCAAAGACCTTGGCGCCAACGTTGGCGTGCTTTCTGGACTAATCAATGAAATTACTCCCCCTTGGGTTGTTCTCTCCATCGGTGCAATCATGAACCTCTTCGGCTACCTCATGATCTGGCTCTCCGTAACTAACCGCATTCCCAGGCCCCACATCTGGCAAATGTGTCTCTACATTTGTATTGGCGCGAACTCCCAGTCTTTCGCGAATACCGGGGCGTTAGTAACCTGCGTGAAGAACTTCCCCGGCAGTCGCGGAAGCATACTGGGACTTCTCAAAGGCTACGTTGGTTTGAGCGGCGCGATTATCACGCAGCTCTACCATGCTTTCTACGGTGACGATTCCACTTCTCTTATTTTGCTCATTGGTTGGTTACCGGCTATGGTTTCTTTCATATTTTTACCTACCATTAGGATCTTGAAACTCGACGCGCTTCAACAGAAGAAGGAGCTCAAGGTTTTTAACCACCTTTTGTATATCTCTCTTGGTTTAGCCTCTTTTCTCATGGTGCTTATCATCGTACAAAACAAGCTTAGTTTCACCACCGTCGAGTACGCCGTCGACGGTTTCGTCGTTGTTTTCTTGCTTCTTCTTCCTCTTGCTATTGTCTTTAGGGAGGAATTCAAACTCTTTAGGGCCAAGATTACAGAAGTCCAACCTTCTTCAAATATAAACTATAAATCAGAAGAAGTCTTAACAGAATCAGAACCTAATAACACCAGCATTATCAATAAATCTGATAACACTGGTAGTACAGATTCTGGTTCTGCGAATGCTTCTTCTGATTCTGCTGCTTCTTGTTGGAGCACGGCGTTCAAGCCTCCGAATCGCGGGGAGGACTATACAATCTTACAAGCGTTGTTTAGCATTGACATGATAATCCTCTTCATTGCAACAACATTTGGTGTGGGTGGAACCTTAACCGCCATTGACAACTTGGGACAAATAGGGAACTCTCTAGGGTACCCTAAAAGGAGCATCACAACATTTGTATCGCTAGTTAGCATATGGAACTACCTCGGACGCGTGGCTTCAGGCTTCGCGTCCGAGATTCTTTTAAAGAAGTACAAGTTCCCTCGGCCATTGATGCTCTCACTGGTGATGCTTCTCTCTTGCTTGGGTCACATCCTCATAGCACTGGGTGTTCCAAACTCTCTGTACTTGTCTTCGGTGATCATAGGGTTCTGCTTTGGAGCTCAATGGCCACTAATGTTCGCCATAATATCCGAAATCTTTGGCCTGAAATACTACTCAACGTTGTACAATTTAGGTGCGGTGGCAAGTCCCGTTGGATCTTACATACTGAATGTGAAAGTGACGGGTTCTTTGTATGATAAAGAGGCTTTGAAGATGTTGGAAGCGAAGGGGATTAAGAGGGTTGATGGGGAAGACCTTTCTTGCGTTGGAGTGCAGTGTTATAGAATGGCTTTTATTATAATCACTGCTTCCACTTTCATTGGTTGCTTGGTTTCGTTTATATTGGTGTTGAGGACTAGAAAGTTCTACAGAAGTGATATCTATGGAAAATTAAGAAGAGAGCTTGAAGCTGCAGAGACTGACATGGAGATGAAGATGGGGACTAGTAACAAAAATGGTGATGCTCTTGTTCCAGAAGAAGGACATGGCCATGCAATAAGGTTAAGCAATTAG 1875 0.4469 MVVASSSSTSSKAPKDGWRAIMSFTHQVITGRWFMVFASLLIMAVAGATYMFGLYSNDIKTSLGYDQSTLNMLSFFKDLGANVGVLSGLINEITPPWVVLSIGAIMNLFGYLMIWLSVTNRIPRPHIWQMCLYICIGANSQSFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIITQLYHAFYGDDSTSLILLIGWLPAMVSFIFLPTIRILKLDALQQKKELKVFNHLLYISLGLASFLMVLIIVQNKLSFTTVEYAVDGFVVVFLLLLPLAIVFREEFKLFRAKITEVQPSSNINYKSEEVLTESEPNNTSIINKSDNTGSTDSGSANASSDSAASCWSTAFKPPNRGEDYTILQALFSIDMIILFIATTFGVGGTLTAIDNLGQIGNSLGYPKRSITTFVSLVSIWNYLGRVASGFASEILLKKYKFPRPLMLSLVMLLSCLGHILIALGVPNSLYLSSVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNLGAVASPVGSYILNVKVTGSLYDKEALKMLEAKGIKRVDGEDLSCVGVQCYRMAFIIITASTFIGCLVSFILVLRTRKFYRSDIYGKLRRELEAAETDMEMKMGTSNKNGDALVPEEGHGHAIRLSN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1849g00001 624 Pfam Nodulin-like 32 279 IPR010658 -
Stsc1849g00001 624 FunFam Nodulin family protein 358 579 - -
Stsc1849g00001 624 Gene3D MFS general substrate transporter like domains 364 577 IPR036259 -
Stsc1849g00001 624 SUPERFAMILY MFS general substrate transporter 32 577 IPR036259 -
Stsc1849g00001 624 MobiDBLite consensus disorder prediction 305 337 - -
Stsc1849g00001 624 CDD MFS_Mch1p_like 31 563 - -
Stsc1849g00001 624 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 33 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1849g00001 Stsc-Chr1849 1141 3015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1849g00001 20 588 Nodulin-like Gene Family AT2G39210 65.789 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1849g00001 - - gmx:100797779 809.29