Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184900g00001 ATGGGAGGTAGAATTTCAAGTGTCACTACTACTTTTGCCATCATACTGGTTCTCTTAGGCACAATAACATGTGAAGCACAGTTATCTTCAACATTTTATGATAATTCATGCCCCAATGCACTTTCCACCATTCGAACCACCATTCGCACAGCGGTCTCTAGGGAGCGCCGCATGGCGGCTTCTCTTGTTCGCCTTCATTTCCATGACTGTTTTGTTCAGGGTTGTGATGCATCAATTTTGCTAGATGATAGTCCTCCTACAATTGTGAGTGAGAAAGGTGCATTTGCTAATAATAACTCAATTAGAGGATATGAAGTCATAGATGAAGCTAAAGCTGCCGTAGAGAAAGTATGCCCTGGAGTGGTTTCGTGCGCAGACATTGTTGCTGTAGCTGCTCGTGATGCATCATTCGCAGCTGGTGGTCCATCATGGGTTGTGAAGCTTGGACGCAGAGATTCAACTACCGCAAGTATTATTTTGGCTAACACTGATCTTCCACTTGCCTCAGATGATCTTACAACTCTCATCTCTAAATTCAGTAACAAAGGACTTAGTGCAAGAGAAATGG 568 0.4349 MGGRISSVTTTFAIILVLLGTITCEAQLSSTFYDNSCPNALSTIRTTIRTAVSRERRMAASLVRLHFHDCFVQGCDASILLDDSPPTIVSEKGAFANNNSIRGYEVIDEAKAAVEKVCPGVVSCADIVAVAARDASFAAGGPSWVVKLGRRDSTTASIILANTDLPLASDDLTTLISKFSNKGLSAREM 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184900g00001 189 Gene3D - 31 165 - -
Stsc184900g00001 189 ProSiteProfiles Plant heme peroxidase family profile. 27 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 Pfam Peroxidase 45 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 SUPERFAMILY Heme-dependent peroxidases 27 189 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc184900g00001 189 Gene3D Peroxidase, domain 2 166 189 - -
Stsc184900g00001 189 PANTHER PEROXIDASE 72-RELATED 24 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 FunFam Peroxidase 31 174 - -
Stsc184900g00001 189 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc184900g00001 189 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184900g00001 Stsc-Chr184900 3 897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184900g00001 7 189 Peroxidase AT1G14550 59.783 7.83e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184900g00001 K00430 - gmx:100786161 272.322