Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1845g00001 GAGAGTGAGAAAGAGCGCTTTGGTGGTGGGAGAGAGAAGGGAGGGTATTGGTCTTGCATTGTTAGAGGCCATGCAACCAATAGAAGGAAAAATGAAGGAGAGTTACAAAGATACGTTGGAAAGAGTGCAAACAAGCTTAAAGGGTGGAAATCTAAGTGTCTTTCATTCGCTGGGAGGTGTACTCTTGCACACTCGGTTCTAAACCCTATCCTCAACTACAGCATGCAGCATGAAAGGGTTATGAGGACTCTCCTTGTTGCTCTGCTTCTCTACAATGCAAAAATGTCGTTCAAGAGATTCGTCGAGATCGGAAGGGTGGCCTTCATCAACTATGGCAAAGAACACAGCAGGCTTGTTGTCATCGTCGATGTCATGGACCAAAATAGAGCTCTGGTGGATGCACCTGACATGGTTAGTTCACAAGTCAACTTCAAGAGGCTCTCATTGACGGGCCTCAAGGTTGACATTAAGAGGGATCGGAGGAAGAATGAGCTGATTAAGGCCATGGAGGATGCTGATGTCAAGAACAAGTGGGAAAAGAGCTCCTGGGGAAGGAAGCTCATTGTTAAGAAGACTAGGGTCAACCTTAATGATTTTGATAGGTTCAAGCTCATGTTGGTTAAAATCAAGAAGGCTGTTGTTGTTAGGCAGAAGCTTGCTAAGTTGAAGAAGGACTCATCTTAG 684 0.4518 ESEKERFGGGREKGGYWSCIVRGHATNRRKNEGELQRYVGKSANKLKGWKSKCLSFAGRCTLAHSVLNPILNYSMQHERVMRTLLVALLLYNAKMSFKRFVEIGRVAFINYGKEHSRLVVIVDVMDQNRALVDAPDMVSSQVNFKRLSLTGLKVDIKRDRRKNELIKAMEDADVKNKWEKSSWGRKLIVKKTRVNLNDFDRFKLMLVKIKKAVVVRQKLAKLKKDSS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1845g00001 227 PANTHER 60S RIBOSOMAL PROTEIN L14 95 224 IPR039660 GO:0003723|GO:0003735
Stsc1845g00001 227 Pfam Ribosomal protein L14 141 211 IPR002784 GO:0003735|GO:0005840|GO:0006412
Stsc1845g00001 227 FunFam 60S ribosomal protein L14-1 95 178 - -
Stsc1845g00001 227 Gene3D - 186 221 - -
Stsc1845g00001 227 CDD KOW_RPL14 101 173 IPR041985 -
Stsc1845g00001 227 SUPERFAMILY Translation proteins SH3-like domain 99 187 IPR008991 -
Stsc1845g00001 227 Gene3D - 95 178 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1845g00001 Stsc-Chr1845 4081 5463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1845g00001 95 227 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 73.684 6.30e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1845g00001 K02875 - gmx:100499889 211.46