Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184525g00001 ATGGCCGTCGGTAATATTGCCGTGTCTTGTAGTGTATGTGGCTTCACTGTGCCTAAAAATTCACAAGTTTGGGTTAATGTATGGGCTATTGGAAGAGATTCAAGTATTTGGACAAACCCCATTGAATTCGTGCCTGAAAGATTCTTAGAGAGTGAGACTGATTTTCAAGGTCGCGATTTCGAGCTAATTCCGTTTGGTGCGGGGAGAAGAATGTGTCCGGGATTGCCACTTGCTTATAGAGGAGTTCACATTGTGTTGGCATCACTTCTTCATGGTTATGATTGGAAGGTAGCAAATTTGAATGAACAAAAGGAAGAGGGTTTGGATATGTCTGAGAAATATGGACTTACTTTGC 355 0.4197 MAVGNIAVSCSVCGFTVPKNSQVWVNVWAIGRDSSIWTNPIEFVPERFLESETDFQGRDFELIPFGAGRRMCPGLPLAYRGVHIVLASLLHGYDWKVANLNEQKEEGLDMSEKYGLTL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184525g00001 118 PRINTS E-class P450 group I signature 72 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 PRINTS E-class P450 group I signature 62 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 PRINTS E-class P450 group I signature 26 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 SUPERFAMILY Cytochrome P450 10 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 Gene3D Cytochrome P450 6 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 Pfam Cytochrome P450 10 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184525g00001 118 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 65 74 IPR017972 GO:0005506|GO:0016705
Stsc184525g00001 118 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184525g00001 Stsc-Chr184525 4080 4434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184525g00001 8 118 Cytochrome P450 AT1G33720 57.658 3.52e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184525g00001 - - gmx:100809483 166.392