Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184475g00001 GTCGGTATGATACTATATGAGGTTCTGAGGTTATATCCATCACTACCATTTATCACTCGAACTACAAAGAAAGAAATGAAACTTGGAGACCTAACAGTGCCAGAAGGAGTTGAGATTCAGTTTCCAATTCTTTTGGTTCACCAAGATTTTGAATTTTGGGGCGATGATGCAAAACAATTCAACCCTGAAAGATTTTCTGAAGGAGTTCTTAAGGCTACAAATGGCAAAGCTTCTTTCTTCCCATTTGGATGGGGTCCTAGAGTCTGCCTTGGTCAAAACTTCTCCTTAATGGAAGCAAAGATGGCTTTATCAGAAATTCTACAACATTTTTCATTTGAACTTTCTCCTTCTTATATTCATGCACCACTCCTTATGGGTTCGCTTCGACCACAACATGGCGCTCATATCATTTTACGTAAGGTGAAAATATAA 432 0.3843 VGMILYEVLRLYPSLPFITRTTKKEMKLGDLTVPEGVEIQFPILLVHQDFEFWGDDAKQFNPERFSEGVLKATNGKASFFPFGWGPRVCLGQNFSLMEAKMALSEILQHFSFELSPSYIHAPLLMGSLRPQHGAHIILRKVKI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184475g00001 143 PRINTS E-class P450 group I signature 89 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PRINTS E-class P450 group I signature 79 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PRINTS E-class P450 group I signature 2 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PRINTS P450 superfamily signature 89 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PRINTS P450 superfamily signature 3 14 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PRINTS P450 superfamily signature 80 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 134 - -
Stsc184475g00001 143 Pfam Cytochrome P450 3 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 82 91 IPR017972 GO:0005506|GO:0016705
Stsc184475g00001 143 Gene3D Cytochrome P450 1 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184475g00001 143 SUPERFAMILY Cytochrome P450 3 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184475g00001 Stsc-Chr184475 4168 4599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184475g00001 3 141 Cytochrome P450 AT3G14680 64.748 1.10e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184475g00001 - - gmx:100808323 219.164