Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184427g00002 ATGATACTTGATGCTTGTGACCTGCACTGGGATAATGGCTTTGGAGTTCTAATGGATAAGTCTCTCATCACTATGCAACTGAACAAGCTTTGGATGCATGATCTGCTACAGGAAATGGGTAAAGAAATTGTACGTCAAGAATCTCCCGGAGAGCCTGGTAAACGTAGCAGGCTATGGTTTCACGAAGATATACTTCATGTATTAAACCAAAACACGGGAACTAACAACATTGAAGGCATAAAGCTTGACCTACCAGAACCAGATACCATAAATGGCAAAGCCTTGTCAAACATGAAAAGACTTAGAGTTCTTATGATCAGCAATGCACGTGTTACAGATGAAATTCAGTATCTCTCTGATGAGCTAAGACTAATCGATTGGCCCGGATACCCGTCTTCAACTCTCCCACCAAATTTCCATCCAAGAAGACTAGTTTCCTTAAACATGAGTCATAGCCACATCAAATATTTGTGGAAGGGAGCAAAGATATTCAGAGACTTGAAACTTTTGTCTTTTAGCTGCTGTGAACACCTCACTGAAATTCCAGACATGTCAATGGTCCCAAACCTTGAGAGTCTCAGCATAGACAATTGTAAAAGTCTAATAAGGGTACATGAGTCCGTAGGAACTCTTGATAAGCTTGTTACTTTAAACCTTATGTTCTGCTCCAACCTCAATACTCTTCCAAGTCGCTTCAAGTTAAAGTCTCTTCGTAATCTTCTCCTTACCGGCTGCTCCAAGCTAAGAAAGTTTCCTGAGATTGTTGAGAATATGGAACTTCTTGAAGAAATCCTTCTTCAAGGGACAGCTATAAAAGAACTACCTCACTCAATCGAATACCTAGTTGGGCTAAAATCCTTATTCCTAGATGCTTGCCAGAACCTTGAGTATCTCCCCAGTAGCCTTCAGAAATTGATATACCTTACAACTCTTAATCTTAGTTTCTGCTCTAAGCTTCGGGAGCTTCCAAAACTTCCACCAAATACAAAATTTTTAGACATAAGTGATTGTAGATCTTTGGAAAGTTTTACAACGTTGTCCAGCCCATCAAATGTTATTGCTGAGGATCTCTCAAGGTTTCAACAAATGAGGTTCATTAACTGCCATAAACTGATTAATGAACAGGTCCAGGTTCACTTAACAAATCTCTTCTACAATGAGGGACCTGATAGTGACACTTATCTGGTGTTTGTTAATGGTGACCTTGTGCTTCCCGGCAGCAAGATCCCAGATTGGTTTCATCATCAAAGTACTAATGGTTCAATTACTCTTGAGATGGCTTCAATTTTGTATGGTAAGCCTGCAAAGTTGTTTCTTAGTGCAGTTATTGAGTTGGAGAAAGGCGCTTCCACGACAAGCATGTTTGCATGTACATATGAAATTTCCATAAACGATCAGAAAGTATTTGCGCAACAAAGAACTTTTGAAGCACTGGACTCAAGTCATGTGTGGTTGAGTAGGATCAAATGCAGTCATTTGATGTGGCACCTCAACAATGTTCGTTATTGGAATCAATTACGGGTTTCATTTTGGATATCTGAAGTATCATCAAAGGTGAAAGTCAGAGCAGTATTGAAGAATTGTGGTTTCCATATATGCTGCAATCAAGAAGGGTATATGGTTAATCCTACAGCAATAAGGAATTCCATAGGATAA 1656 0.3943 MILDACDLHWDNGFGVLMDKSLITMQLNKLWMHDLLQEMGKEIVRQESPGEPGKRSRLWFHEDILHVLNQNTGTNNIEGIKLDLPEPDTINGKALSNMKRLRVLMISNARVTDEIQYLSDELRLIDWPGYPSSTLPPNFHPRRLVSLNMSHSHIKYLWKGAKIFRDLKLLSFSCCEHLTEIPDMSMVPNLESLSIDNCKSLIRVHESVGTLDKLVTLNLMFCSNLNTLPSRFKLKSLRNLLLTGCSKLRKFPEIVENMELLEEILLQGTAIKELPHSIEYLVGLKSLFLDACQNLEYLPSSLQKLIYLTTLNLSFCSKLRELPKLPPNTKFLDISDCRSLESFTTLSSPSNVIAEDLSRFQQMRFINCHKLINEQVQVHLTNLFYNEGPDSDTYLVFVNGDLVLPGSKIPDWFHHQSTNGSITLEMASILYGKPAKLFLSAVIELEKGASTTSMFACTYEISINDQKVFAQQRTFEALDSSHVWLSRIKCSHLMWHLNNVRYWNQLRVSFWISEVSSKVKVRAVLKNCGFHICCNQEGYMVNPTAIRNSIG 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184427g00002 551 SUPERFAMILY L domain-like 45 366 - -
Stsc184427g00002 551 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 342 IPR044974 GO:0006952
Stsc184427g00002 551 Gene3D Ribonuclease Inhibitor 61 232 IPR032675 -
Stsc184427g00002 551 Gene3D Ribonuclease Inhibitor 233 383 IPR032675 -
Stsc184427g00002 551 Pfam C-JID domain 404 534 IPR045344 -
Stsc184427g00002 551 SUPERFAMILY "Winged helix" DNA-binding domain 10 68 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184427g00002 Stsc-Chr184427 2825 4743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184427g00002 1 335 WRKY Transcription Factor Family AT4G12020 41.292 2.98e-60 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184427g00002 - - ahf:112749316 1014.6