Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184379g00001 ATGGAATATGCTCGGTGGGTTGATGAGCATCAACATTTGCTAAATGAACTTAGATCAGCCTTAAATTCTCAAATGGGTGATAATGAACTGCATCTTCTTGTTGATGGTGTCATGGCACATTATGATGAATTATTTCGGCTAAAGAGCATAGGAGCAAAGGCTGATGTCTTCCACATGCTCTCTGGGATGTGGAAGACACCTGCAGAGAGGTGGCTCATGTGGCTCGGCGGATTTCGCTCGTCCGAACTTCTCAAGATAGTTAAGAACCACCTTGAGCCCTTAACAGAACAGCAGTTGTTGGGGATTTGTAATCTTCAGCAGTCTTCTCATCAGGCAGAGGATGCTTTGAATCAAGGTATGGAAGCGTTGCAACAATCTCTTTCGGACACACTTTCCTCGGTCGCCCTAGGACCCGCCGGTGCCGGAAATGTTGCTGATTATATGGGCCAGATGGCAATTGCAATGGGTAAGATTGCCAATCTAGAGAGTTTCCTTCATCAGGCTGATGTATTGAAGCAAGAAATGCTGCAGCAGTTGCAACGAATTTTGACCACGCGACAAATTGCAAGAGCCCTCCTTGTGATGAATGATTACATTTCAAGATTAAGAGCACTCAACTCATTATGGTTAGCTCGCCCTAGAGAGTAG 648 0.4537 MEYARWVDEHQHLLNELRSALNSQMGDNELHLLVDGVMAHYDELFRLKSIGAKADVFHMLSGMWKTPAERWLMWLGGFRSSELLKIVKNHLEPLTEQQLLGICNLQQSSHQAEDALNQGMEALQQSLSDTLSSVALGPAGAGNVADYMGQMAIAMGKIANLESFLHQADVLKQEMLQQLQRILTTRQIARALLVMNDYISRLRALNSLWLARPRE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184379g00001 215 ProSiteProfiles DOG1 domain profile. 1 212 IPR025422 GO:0006351|GO:0043565
Stsc184379g00001 215 PANTHER TRANSCRIPTION FACTOR TGA9 1 215 - -
Stsc184379g00001 215 Pfam Seed dormancy control 14 88 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184379g00001 Stsc-Chr184379 233 2850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184379g00001 1 215 bZIP Transcription Factor Family AT1G68640 73.488 3.18e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184379g00001 K14431 - cave:132183862 360.147