Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184321g00002 ATGAAGAATATGATTTTCTGTAGTAAGAAGGCTAAGTTGTTTTTTCCCAATGGAGGGATTCATCCAATAACAAATGAAGTCCTGGCATATGTCCAGTTATTTTGTCAGTCACAAGAGAAATGGGAGCCAGTTTTACAACAATACCTGCTGGGTTCAGACAGAGCTGGAACATCGATTTCATTCTCTGCGGAGATGGTTTCAATGTTGAAGCATTTAGAGAGAAAACTGAGAACTAACTCCAAGAACTACAAGGATCCTGCTTTGTGCTATTTCTCCATGATGATTAATAGGAGGTACATACAAAACTTTCTAGAAGATATGCATTTAATAACCTACTTGAGCAATGATTGGGTCCAAAATAATAAACAGAAAGTTCAAGAGAACTTTGAGCTCTATTACAGAAGCTCATGGAACAAGGTGGTTGATTATCTGAAGCTGTACAACAACGAGTCCTTGGTGCCTGCTGTTGATGCTGAATCAATGAAAGAGAAACTTATCTTGTTCAATTCACACTTCAAGAAGATATGCGCTCTTCAATCTACATGGTTTCTTTTTGAAGAGAAAATTAGAAAAGAAATAATAACATCCCTAGAGAACATGTTGCTTCCTGCATATGGAAAATTCATTGGAAAGTTCCAGGATGTTCTTGCTAAAGATGCATATGAGTATATAGAGTATGGAATGTTTGATATACAAGCTCGGCTGAACGATTTGTTTAGAGGAAGTAGGAATTAG 735 0.3673 MKNMIFCSKKAKLFFPNGGIHPITNEVLAYVQLFCQSQEKWEPVLQQYLLGSDRAGTSISFSAEMVSMLKHLERKLRTNSKNYKDPALCYFSMMINRRYIQNFLEDMHLITYLSNDWVQNNKQKVQENFELYYRSSWNKVVDYLKLYNNESLVPAVDAESMKEKLILFNSHFKKICALQSTWFLFEEKIRKEIITSLENMLLPAYGKFIGKFQDVLAKDAYEYIEYGMFDIQARLNDLFRGSRN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184321g00002 244 SUPERFAMILY Cullin repeat-like 12 239 IPR016159 -
Stsc184321g00002 244 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 241 IPR004140 GO:0000145|GO:0006887
Stsc184321g00002 244 Pfam Exo70 exocyst complex subunit 12 237 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc184321g00002 244 Gene3D Exocyst complex component Exo70 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184321g00002 Stsc-Chr184321 2389 3123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184321g00002 11 242 EXO70 exocyst subunit family AT5G58430 40.171 6.59e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184321g00002 - K07195 aip:107607033 325.479