Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184226g00001 ATGGCTCGTTCTCTTCCTTTGGTTTCCACCATTTTTGTCCTTCTTTTGCTTCTGGTGGCCACTGAGATGGGGCCAACAATGGTAGCTGAAGCTAGAACTTGTTTGTCTCAAAGCCATCGCTTCAAAGGACCGTGTGTGAGTGACACGAACTGCGCCTCCGTTTGCAAAACGGAGGGCTTCCCTTCTGGGGATTGCCGCGGCTTCCGTCGCCGATGCTTCTGCAAGAAGCATTGTGCTTAA 240 0.5167 MARSLPLVSTIFVLLLLLVATEMGPTMVAEARTCLSQSHRFKGPCVSDTNCASVCKTEGFPSGDCRGFRRRCFCKKHCA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184226g00001 79 SMART gth_4 33 78 IPR003614 GO:0006952
Stsc184226g00001 79 PANTHER DEFENSIN-LIKE PROTEIN 1 8 78 - -
Stsc184226g00001 79 Gene3D - 32 78 IPR036574 -
Stsc184226g00001 79 CDD Knot1 43 74 IPR003614 GO:0006952
Stsc184226g00001 79 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Stsc184226g00001 79 Pfam Gamma-thionin family 32 78 - -
Stsc184226g00001 79 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Stsc184226g00001 79 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Stsc184226g00001 79 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Stsc184226g00001 79 FunFam Defensin-like protein CAL1 32 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184226g00001 Stsc-Chr184226 1890 2771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184226g00001 1 78 Plant Defensins Gene Families AT2G02120 64.103 9.40e-33 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184226g00001 - - gsj:114420878 110.538