Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc184003g00001 ATGTTTCCAGCAACCATACCTCTGCTTACAGTGCTCCTTCTCGCACTTACCCTCATTATCACTGTATTAATGTTCCTAACAAGAAAACATCAGGATAGATCACTACTCCCACCGGGACCACCGGGATTTCCGGTCTTGGGTAACCTCCCCATGCTGCGGGGGAATTTCCCACACCGCACGCTCCAAGTCATGGCCCAGAGATATGGCCCAATCATGTTCCTGCGGTTCGGACAGGTCCCAGTCGTCGTTGTTTCAAACGCCGAAGCTGCAGAAATGACCCTAAAGTCACACGGTTCTACTTTTGCGAGCCGTCGCAAATTCCAATCAAGTGAGTACATATCATACGGCTCCAAAGGGATGGTGTTCTCGGAATACGGTGCGTACTGGCGCAACATGAGGAGAGTGTGCATGTCGCATCTTCTGAGCGCGTCCAAGGTGTCGTCTTTTGCTGGTGTGAGGGAGGGAGTAGTGGAAGCTGCGGTGAAATCAATCAAGAGAGCCGCAGATGGGGGTGAGGTGGTGAATGTTACTGAGGTGGTGAGTCATCTTGTAGAGGATAATATGTATAAAATAGTGTTGGGGCGTAGTAGGGATGAAGAGGTTAATTTGAATGCCCTGCTTCATGAGGTTTTTTACGTCAGCGGAGCATTCAATCTTGCAGATTACGTTCCTTGGTTGGGATTTTTTGACATTCAGGGATTGACACGAAGGTTCAAGAAACTTGGTAAAGCCGTTGACCAAGTGTTGGAGAAGATAATTGAGGAGCATCACAAGGGTGGTTCTGGTTCGGGTGCAACTCATGCCTCCGGGAACCATAGGGATTTCGTTGACATATTACTCTCACTTATGTACCAACCCATTGATCCACGTGATGAACAGAATCAAGTCCTGGATCGGACTAACATTAAGGCTATACTCCTTGATACTATTGCAGGGTCATTGGAAACCTCTACCAGCATTATTATATGGGCTTTGTCCGAGCTCTTAAAGCATCCAAGAGTGATGAGAAAACTTCAAGACGAGCTAACTAATGTGGTTGGATTGAACAAACTTGTTCAAGAGACTCATTTAGCAAACCTAACTTACTTGGATATGGTGATAAAAGAAACATTACGATTACATCCTGCTGGAGCATTATTCCCCCGTGAGACAAATAAAGATGCTATGGTGAATGGTTATCATATAAGAAATAAAACAATGGTCCTAATAAACTTGTGGGCAATAGGAAGGGATCCTAAGGCATGGTCTGATAATGCTGAAGAGTATTATCCGGAGAGATTTATAACCAATGACTATGACTACCGTGGGTACAACTTTATGTTTATACCATTTGGTTCTGGCAGCAGAGGATGTCCTGGAATACATCTGGGACTCGCTATGGTGAAACTTGTTGTGGCCCAGTTAGCACATTGCTTCAATTGGGAACTACCACCCAACATGACTCCAGATGAGTTGGACATGACCGAGAAATTTGGTCTCTCACTGCCAAAAGCCGAAGACTTACTTGCTGTGCCAACTTATCGTTTTCTTCTTAAGTCTACCTAA 1545 0.4524 MFPATIPLLTVLLLALTLIITVLMFLTRKHQDRSLLPPGPPGFPVLGNLPMLRGNFPHRTLQVMAQRYGPIMFLRFGQVPVVVVSNAEAAEMTLKSHGSTFASRRKFQSSEYISYGSKGMVFSEYGAYWRNMRRVCMSHLLSASKVSSFAGVREGVVEAAVKSIKRAADGGEVVNVTEVVSHLVEDNMYKIVLGRSRDEEVNLNALLHEVFYVSGAFNLADYVPWLGFFDIQGLTRRFKKLGKAVDQVLEKIIEEHHKGGSGSGATHASGNHRDFVDILLSLMYQPIDPRDEQNQVLDRTNIKAILLDTIAGSLETSTSIIIWALSELLKHPRVMRKLQDELTNVVGLNKLVQETHLANLTYLDMVIKETLRLHPAGALFPRETNKDAMVNGYHIRNKTMVLINLWAIGRDPKAWSDNAEEYYPERFITNDYDYRGYNFMFIPFGSGSRGCPGIHLGLAMVKLVVAQLAHCFNWELPPNMTPDELDMTEKFGLSLPKAEDLLAVPTYRFLLKST 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc184003g00001 514 CDD CYP71-like 67 501 - -
Stsc184003g00001 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc184003g00001 514 FunFam Cytochrome P450 83B1 24 504 - -
Stsc184003g00001 514 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 SUPERFAMILY Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 Pfam Cytochrome P450 37 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc184003g00001 514 PANTHER CYTOCHROME P450 93A3-LIKE 11 508 - -
Stsc184003g00001 514 Gene3D Cytochrome P450 22 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc184003g00001 Stsc-Chr184003 254 1798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc184003g00001 28 504 Cytochrome P450 AT3G48310 36.534 1.25e-113 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc184003g00001 - - adu:107478736 588.571