Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183843g00001 ATGGTGTTGGTGCAGGTTGCGTTTACTGCTGTGAATGTGTTCTACAAGCTTGGTATCAATGATGGAATGAGCGTTAAGGTTCTTATTGCTTATCGTCTTGCTTTTGCTGCTGCTTTCACTGTTCCTCTTGCTCTCTTTTCTGAAAGGAATAAGAGACCAAAGATGACTTGGAGGGTGGTTTGCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTTTGAGGCAATGGCTTTGACATCAGCAACTTTTGTGTCTGCCATCTACAACCTGATACCAGGCATCACCTTTGTGTTGGCCATAACCTTTGGTTTTGAGAAATTGAAACTGGGGGACCAGCAGGGAAGGCCAAGGAAGTTGGAACTTTGA 384 0.4401 MVLVQVAFTAVNVFYKLGINDGMSVKVLIAYRLAFAAAFTVPLALFSERNKRPKMTWRVVCMSFLCGLFGGSLFQNLFFEAMALTSATFVSAIYNLIPGITFVLAITFGFEKLKLGDQQGRPRKLEL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183843g00001 127 Pfam EamA-like transporter family 5 116 IPR000620 GO:0016020
Stsc183843g00001 127 PANTHER WAT1-RELATED PROTEIN 1 120 IPR030184 GO:0016020|GO:0022857
Stsc183843g00001 127 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183843g00001 Stsc-Chr183843 4801 5352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183843g00001 1 123 Nodulin-like Gene Family AT1G25270 43.902 1.36e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183843g00001 - - gmx:100809587 186.422