Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183724g00001 ATGAATATCATTGCTTTAGCGCGATCCTTCAGTGATGCGTCATTATTGGCCACAATGGTGTCTCCAAGACCCATTGAATTTAGATGGATTTCAGCATCAAGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAGACGCTATGATGCTGGTCTTTCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTTCTTGACATACCATTCGCTTTCAAAAGAGTGGAAGCCATGCTTTACAGAGCCAATTTCGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACTCTCGAAACAGCGAGTGAGGAGTTGAAGAACAGCCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGGAACAGAATGAATGTCGGTACCTATCGCGGCGATGCCACTGCGTTCAAGCTAGACACACTACTAAAACTTGTTGATATAAAGGGAACAGATGGAAAGACCACACTGCTTCACTTTGTTGTACAAGAAATCATTAGAACGGAAGGCTCAACCGGCGAATCTTCGAGCGAAAATGTAAAGACAGAAATGAATTCTCAGTTTAATGATGAGGAGTTCAGAAAGAAAGGATTGCAGGTTGTTGCTGGACTGAGTAGAGACCTTGGAAACGTAAAAATAGCTGCAGGAATGGACTCAGAAGTCTTTAGTGGTTACGTGTCAAAGCTCGAATGGGGTCTTGATAAAGTGAGATTGATTTTGCATCACGAAAAGCCGGATATGCAGGGGAATTTCTTCAATTCAATGAAGCTATTTCTGAAAGAGGCCGAAGTGAAAATCGTTATGATTAAGTCTGATGAGAGAAAGGCTTTTTTTCTTGTGAAAGAAGTAACAGAGTACTTTCATGGGAATACCGCAAAGGAAGATGCACACCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGATCAGGTCTGCAAAGAAGTGGGGAAGATGCAAGAAAGAACTGTGATTGGTTCCGTGAGATCCTTCCGGATAGCTGCGAGCGCGTCATTAGAGGTTCTCAACACGTACCGTGCGAGGCAAGATACAACAAGTTCAGATGAGGATAGCTCATCTCCTTAG 1140 0.4228 MNIIALARSFSDASLLATMVSPRPIEFRWISASRNPEGLGAELLETLVKMAPTKEEEIKLRRYDAGLSKLGSAERFLKTVLDIPFAFKRVEAMLYRANFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDATAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRTEGSTGESSSENVKTEMNSQFNDEEFRKKGLQVVAGLSRDLGNVKIAAGMDSEVFSGYVSKLEWGLDKVRLILHHEKPDMQGNFFNSMKLFLKEAEVKIVMIKSDERKAFFLVKEVTEYFHGNTAKEDAHPFRIFMIVRDFLNILDQVCKEVGKMQERTVIGSVRSFRIAASASLEVLNTYRARQDTTSSDEDSSSP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183724g00001 379 Gene3D Formin, FH2 domain 23 345 IPR042201 -
Stsc183724g00001 379 Pfam Formin Homology 2 Domain 35 327 IPR015425 -
Stsc183724g00001 379 PANTHER FORMIN-RELATED 35 364 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc183724g00001 379 SMART it6_source 1 342 IPR015425 -
Stsc183724g00001 379 SUPERFAMILY Formin homology 2 domain (FH2 domain) 26 341 - -
Stsc183724g00001 379 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 353 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183724g00001 Stsc-Chr183724 1495 5395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183724g00001 35 370 FH2 protein (formin) Gene Family AT5G67470 72.566 5.48e-161 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183724g00001 - - gmx:100803578 529.635