Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183573g00001 ATGGCTGAATCACTTGTTGGAGGAGCCTTCCTCTCTTCTTTTGTCAATGTTCTTTTTGACAGGCTCTCTGATCATGGGATTATCAACTTGATCCGAGGGAAGAAGCTTAGTGAGAATATGATCCAAAGGTTCAAGACAATCCTGAATGCTGCTGAAGCCTTGCTGAACGATGCTGAACGCAGACAAATCAGAGAGGGGCCAGTGAAGGTCTGGCTGGACGATCTCAAAGATGCTCTCTATGAGGCTGATGACTTCCTGGATGAAATCGTCACCAAAGCTGCCACTAAGAAGGATCCTGCTCCACCAGGTAACTTCCTGTCTCGTTTTCTGAATATGAAAGATAGAGAGATAGTTACTAGGATGGAAGATGTCATTGCTAGGCTAGAGTCAATTGTGAATCAAAAAGACACTCTTGGCCTGAAAGAGATACCAATGGAGAACATGTCATGGAGAATTCCATCAACTTCTCTAGTTACGGTGTCTGATATATATGGTAGGGATACAGATAGGGATGCCTTAGTCAAATTGTTGTTACATGATGCTACTAAGGATGGTGAGGTGTCCGTGATCCCCATCGTTGGCATGGGCGGGGTAGGAAAAACCACTTTGGCTCAATTGGTTTACAATGATGATAGAGTGCAGCAAAAGTTTAATGTTAATGCATGGGTTTGTGTTGGGGAAGAATTTAATATTCTTAAGGTCACAAAGAATATATTAGACGAGGTAACTCCTAGGTCTTGTGAAAAGAATGACTTAAATTATGTTCAACAACGTTTGAGGGATGAGCTAAGAGAGAAGAGTTTTTTGGTTGTTCTGGATGATATGTGGGAGACAGATTATTTTCATTGGAGAGCTTTTTTAAATCCCTTCCAATGTGGAAGTCAAGGAGGTAAGATTCTTGTAACAACCCGCCTTGAGACCGTTGCTTTATCGGTGAAAACTATTCCAGCTTACAATTTGAGTTTGCTGAATAATGAACAATGTTGGTTGGTGTTTGCAAACCATGCATTTTTTCCAACTGAATCCCGAGATCGTTTGGCTTTAGAACAAGTTGGTAGAAAAATTGTTGAAAAGTGCAAAGGACTACCTTTGGCTGCTCAGTCACTTGGGGGCTTGTTGAGAACCAAGGATAATGTAAGTGACTGGGAAGATATTTTGGTGAGTGAGATGTGGGAGATTTCTGAAGAGTGCATGATTCTTCCTGCATTAAAAATAAGCTATCATTATCTCCCTTCACACTTAAAACGTTGTTTTGTCTTTTGTTCATTATATCCCAAAGATTATAAATTCAATAGAGATGAATTGGTATTGTTGTGGATGGCGGAAGGTCTTTTGAAACAACCTAGGAGTGGAAGCATTTTAGAAAACAAATACTTCAATGATTTAGTTGCACGATCATTTTTTCAACCTTGTAAAAATTCTCATGAAAATTCATTTGTGATGCACGACCTCATGCATGATTTAGCGACATTCTATGGTGGAAAGTTCTTTGTTAGAACCTTTGAACTGAAGAATGTAGCCAAAAACACTCGTCATTTGTCATATGATCTTGGTGACGATGATTCAGTCACCAAGATCATGAAAAAATGTGATAGTTTAAGTCATGTGAGGACTTTGTTGCAAATCAATAAATACAGTGAGCACAAAGTGAGAATTGATCCTTGTGGCTTACTAGCGCGGTTGAAGCGCGTACGTGTTTTGATATTTAGATCATTTGAAATGGACTCATTGTCTAATTCAATTAGTGAACTGATCCATCTACGTTATTTGGATCTCTCTAACACACTTGTTGTAACATTGCCTGAGTCCTTGAATGATTTGTACAATTTACAAACGTTGAAGTTGAAAAATTGCACAAGACTTGAAAAGCTTCCATCAAGGATGCAAGACCTTGTAAATTTGTGTCATCTTGATATTAATGGCACTTGTATACAAGAGATGCCACAAGGGATGAGCAAGTTAAAAGGTTTGCAATTTTTAAGTGACTATAAGGTGGGGAAGCACGAAGTGAATGGAATTGGGGAATTGGGAGAGCTAGCAAATCTTCATGGTTCGTTGTGTATTGAGAAACTAGAGAATGCGAGCAGCAGTGGTGAAGCATCGAATGCAAGGATGGATGAAAAGACATACCTGAATACTTTACATTTGAAGTGGTCATCAGATGAAGATAATAATGTGGTTGATTCCAACACTGAAAGAGATGTACTTGACAAATTACATCCTCACAAAGACTTGAAAGAGCTAAATATAGAGGGTTACAGGGGTACCATGTTTCCAGATTGGGTAGGGCAGTCTTGGTACCAAAAGATGACTAAGTTGGAGCTGAGGGGATGCAAGAATTGTTGGGTGCTTCCTTCACTTGGACAGTTACCCTCTCTCGTGGAATTGTGTCTTTCCGGATTTGATATGGTGAAGAAGATTGGTGCTGAATTCTATAAGGTTGATGGAACTCATCAAGAGACACCCTTCCGATCCCTTAAAACTCTGATGATTGAAAGAATGCCTTGCTGGGAGGAATGGGAGTCATTTGAATATGGTGATGATGATGATCATGCACCATTTCCTCAACTCGAGAAGCTTTGGATAAAGCACTGTCCAAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAGGAACTCTACATTTCAGGATGCTCCCTCTATCATCAGTTTAAGAATAGAAGGCGAACAGGAAGCAAGAATCGGGGACCTGCCACTTTCACTGCAAGAACTATCAATAGAAGGAAACCAGCTTGTGGAGTCTCTGTTTGA 2778 0.3999 MAESLVGGAFLSSFVNVLFDRLSDHGIINLIRGKKLSENMIQRFKTILNAAEALLNDAERRQIREGPVKVWLDDLKDALYEADDFLDEIVTKAATKKDPAPPGNFLSRFLNMKDREIVTRMEDVIARLESIVNQKDTLGLKEIPMENMSWRIPSTSLVTVSDIYGRDTDRDALVKLLLHDATKDGEVSVIPIVGMGGVGKTTLAQLVYNDDRVQQKFNVNAWVCVGEEFNILKVTKNILDEVTPRSCEKNDLNYVQQRLRDELREKSFLVVLDDMWETDYFHWRAFLNPFQCGSQGGKILVTTRLETVALSVKTIPAYNLSLLNNEQCWLVFANHAFFPTESRDRLALEQVGRKIVEKCKGLPLAAQSLGGLLRTKDNVSDWEDILVSEMWEISEECMILPALKISYHYLPSHLKRCFVFCSLYPKDYKFNRDELVLLWMAEGLLKQPRSGSILENKYFNDLVARSFFQPCKNSHENSFVMHDLMHDLATFYGGKFFVRTFELKNVAKNTRHLSYDLGDDDSVTKIMKKCDSLSHVRTLLQINKYSEHKVRIDPCGLLARLKRVRVLIFRSFEMDSLSNSISELIHLRYLDLSNTLVVTLPESLNDLYNLQTLKLKNCTRLEKLPSRMQDLVNLCHLDINGTCIQEMPQGMSKLKGLQFLSDYKVGKHEVNGIGELGELANLHGSLCIEKLENASSSGEASNARMDEKTYLNTLHLKWSSDEDNNVVDSNTERDVLDKLHPHKDLKELNIEGYRGTMFPDWVGQSWYQKMTKLELRGCKNCWVLPSLGQLPSLVELCLSGFDMVKKIGAEFYKVDGTHQETPFRSLKTLMIERMPCWEEWESFEYGDDDDHAPFPQLEKLWIKHCPKLRGDLPTFLPSLKELYISGCSLYHQFKNRRRTGSKNRGPATFTARTINRRKPACGVSV 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183573g00001 925 FunFam Probable disease resistance protein At1g61300 149 315 - -
Stsc183573g00001 925 Gene3D - 15 131 - -
Stsc183573g00001 925 Coils Coil 41 61 - -
Stsc183573g00001 925 PANTHER DISEASE RESISTANCE PROTEIN RP 52 865 IPR044974 GO:0006952
Stsc183573g00001 925 FunFam Probable disease resistance protein At1g63360 407 491 - -
Stsc183573g00001 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 421 IPR027417 -
Stsc183573g00001 925 PRINTS Disease resistance protein signature 189 204 - -
Stsc183573g00001 925 PRINTS Disease resistance protein signature 359 373 - -
Stsc183573g00001 925 PRINTS Disease resistance protein signature 262 276 - -
Stsc183573g00001 925 PRINTS Disease resistance protein signature 605 621 - -
Stsc183573g00001 925 Gene3D - 322 405 IPR042197 -
Stsc183573g00001 925 Gene3D - 406 490 IPR036388 -
Stsc183573g00001 925 SUPERFAMILY L domain-like 480 890 - -
Stsc183573g00001 925 Gene3D Ribonuclease Inhibitor 518 899 IPR032675 -
Stsc183573g00001 925 Gene3D - 146 315 IPR027417 -
Stsc183573g00001 925 Pfam Rx N-terminal domain 10 98 IPR041118 -
Stsc183573g00001 925 Pfam NB-ARC domain 172 386 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183573g00001 Stsc-Chr183573 1 2877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183573g00001 527 660 WRKY Transcription Factor Family AT4G12020 28.058 2.93e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183573g00001 - - ahf:112730660 1150.19