Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183556g00001 ATGGATGAAGACGACCTATTATCCTCTCCTCCTTCAAAACAAGAACAATACTACCCTTACTGTAACCAATTATTACAACCCCACCATTTATTATCATCCACCACTACCACTACCACTACTCATCATGATTTATCATCAACATCATTCTCACCACCCACCCCACCACCACCAGATTTCAACTTCGAATTCTCTTCAGGCACGTGGGCACCCCACATCCTCCTCGACACCGCACGTGCCATCGCTGACAACAACACCACTCGACTCCATCAACTCCTATGGATGCTCAACGAGATAAGCTCCCCATACGGCGACGCAAACCAAAAACTCGCCGCGTATTTCCTTCAAGCCTTGTTCAGCCGCATAACGGCCGCCGGCGACCGAACCTACCGGACGTTAACGTCGGCTTGGGACAAGACTTGCTCTTTTGAATCCACCAGGAAGACGGTTCTAAAGTTCCAGGAGGTTAGTCCCTGGACCACGTTTGGACACGTGGCGTCCAATGGCGCCATCTTACAGGCTCTCGATGGAGAGCTCAACTTGCACATTGTGGATTTCAGCAACACGTATTCCACTCAGTGGCCCACGCTTCTAGAAGCTTTGGCCACTCGCAGCGACGACACCCCGAACCTCCGTTTAACCACCGTCGTCACCGCCAGAGCCGGTGACTCTGGGGATGCGGTTCAGAGGGTCATGAAGGAAATAGGCACAAGAATGGAGAAATTTGCGAGGCTAATGGGAGTACCCTTCAAATTCCACGTCGTTCACCACGTCGGCGATCTCTCCAACCTCAACATCGGCGATTTGGACATCAAGAACGACGAGGCCTTAGCCATCAACTGCGTGAACACGCTCCACCAGATCCCACCCGTCGGCAACCACCGCGACACGTTGATATCCTCGCTAGTAAAGCTAAACCCTCGGATCGTTACGGTGGTGGAAGAAGAAGCGGATTTGGACGTTGGCATGGAAGGCCACGAGTTCCTTAAAGGGTTCGTGGAATGCGTGAGGTGGTTTAGGGTTTACCTGGAAGCCCTCGAGGAGAGCTTTACGAGGACGAGTGGGGAGAGACTGATGCTGGAGAGGGCCGCGGGGAGGGCGATTGTGGACCTGGTGGCCTGTACGGCGGAAGATTCTGTGGAGCGGAGGGAGACGGCGGGGAAATGGTCGCAGAGGATGAGGGAAGGTGGGGGGTTCAATACGATGCCGTTTAGTGAGGAGGTGTGTGATGACGTCAGGGCGCTGTTGAGAAGGTATAGGGAAGGATGGTCGATGGCAAAGTGTTCCGATAACGGAATATTTCTTTGTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAAGCCTTAG 1350 0.5363 MDEDDLLSSPPSKQEQYYPYCNQLLQPHHLLSSTTTTTTTHHDLSSTSFSPPTPPPPDFNFEFSSGTWAPHILLDTARAIADNNTTRLHQLLWMLNEISSPYGDANQKLAAYFLQALFSRITAAGDRTYRTLTSAWDKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILQALDGELNLHIVDFSNTYSTQWPTLLEALATRSDDTPNLRLTTVVTARAGDSGDAVQRVMKEIGTRMEKFARLMGVPFKFHVVHHVGDLSNLNIGDLDIKNDEALAINCVNTLHQIPPVGNHRDTLISSLVKLNPRIVTVVEEEADLDVGMEGHEFLKGFVECVRWFRVYLEALEESFTRTSGERLMLERAAGRAIVDLVACTAEDSVERRETAGKWSQRMREGGGFNTMPFSEEVCDDVRALLRRYREGWSMAKCSDNGIFLCWKDQPVVWASAWKP 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183556g00001 449 MobiDBLite consensus disorder prediction 35 56 - -
Stsc183556g00001 449 ProSiteProfiles GRAS family profile. 60 448 IPR005202 -
Stsc183556g00001 449 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 441 IPR005202 -
Stsc183556g00001 449 Pfam GRAS domain family 71 448 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183556g00001 Stsc-Chr183556 2141 4365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183556g00001 41 449 GRAS Transcription Factor Family AT4G37650 65.707 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc183556g00001 GRAS 7.9e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183556g00001 - - gmx:100778524 627.861