Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1834g00001 ATGAACTTGGAATCTTGTTCATCATTTACCATCTTCAACTTTCTATGGCCTTGTTTTATTCTTCTCTCCCTCTTCCCAACTATGGCTTCATGTAGCTGCACATGTGACACAACACAAACGGAACCCAACGACGGTTCATATTCAACCCAAACAATTATTCATTACAAAATCATTTCAATCGCATCCGTTCTTTTGGCTGGCGCGCTCGGCGTAAGCCTTCCACTGGCCAGCAACAGGATTCCAGCACTTAACCCTCAGAACGACATCTTCTTCATGATCAAGGCCTTTGCAGCGGGTGTCATTCTCTCGACCGGGTTCATCCATATTCTACCTGACGCGTTCGAGAGCTTGAACTCGCCGTGCCTTACGGCGGTTAAGCCGGTTTGGGGGAACTTCCCTTTTGCTGCTTTGGTTGCCATGTTAGCTTCCATTGGAACATTGATGGTGGATTCTTTTGCCAGTGGGTATTATCATAGGCAACACTTTAACATTTCAATAAAGCAGGTTCCTGCTGCTGATGATGAAGAAATGGGTGATCATGGTCATGCTGGTCATATACATGTTCATACACATGCCACACATGGTCATGCTCATGGTTCAGTTAATTCTTCTGACGTTTTGGTAACATCTGAACTAATCAGGAAGAGAATCATATCACAAGTGCTGGAGATAGGAATAGTGGTCCATTCAGTGATAATTGGAATATCTTTGGGAACTGCAGATAGCATTGATACCATTAAGCCTCTCTTGGTAGCTCTCTCTTTTCATCAATTCTTTGAGGGCATGGGCCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCCAGGTCAACAGCAATTATGGCAACATTTTTCTCCCTAACAACCCCAATTGGAATAGCAATTGGGATGGGGATATCAAGTGTGTACAAAGAGAATAGCCCAACTTCTCTAATTGTTGAAGGGGTCTTCAATTCAGCTTCTGCTGGAATCCTCATTTACATGGCACTTGTTGATCTTCTAGCAGCAGATTTTATGAGTCCAAAGTTGCAAAATAATTTGAAGCTCCAATTAGGAGCTAATATCTCACTTCTCTTGGGTGCAGGTTGCATGTCACTATTGGCCAAATGGGCCTAG 1116 0.4355 MNLESCSSFTIFNFLWPCFILLSLFPTMASCSCTCDTTQTEPNDGSYSTQTIIHYKIISIASVLLAGALGVSLPLASNRIPALNPQNDIFFMIKAFAAGVILSTGFIHILPDAFESLNSPCLTAVKPVWGNFPFAALVAMLASIGTLMVDSFASGYYHRQHFNISIKQVPAADDEEMGDHGHAGHIHVHTHATHGHAHGSVNSSDVLVTSELIRKRIISQVLEIGIVVHSVIIGISLGTADSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTAIMATFFSLTTPIGIAIGMGISSVYKENSPTSLIVEGVFNSASAGILIYMALVDLLAADFMSPKLQNNLKLQLGANISLLLGAGCMSLLAKWA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1834g00001 371 NCBIfam ZIP zinc/iron transport family 47 371 IPR004698 GO:0005385|GO:0016020|GO:0071577
Stsc1834g00001 371 PANTHER ZINC/IRON TRANSPORTER 54 365 - -
Stsc1834g00001 371 Pfam ZIP Zinc transporter 55 368 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1834g00001 Stsc-Chr1834 3283 7078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1834g00001 3 371 Inorganic Solute Cotransporters AT3G12750 59.091 1.86e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1834g00001 K14709 - gmx:100805124 518.079