Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183491g00001 ATGGAAACGTGGTTCTTTCTAGTGGTCTCCGCATGCGTCTGTCTTCTCATCAGAGCTATAATACTTAACCTTACCACCACCACTAACGGCCCACGTCTTCCCCCGGGCCCACCATACATTCCTGTTGTAACCACAGTCTCCTGGCTTGTTAAATCATTCTCCCAGATTGAGCCCGTCCTCGTGGGCCTTCGGGCCAAGTACGGGCCCATCATCACACTCCGTATTACCAGCCGCCCTGCCATCTTCGTGGCGGACCGCTCCTTCGCCCACCAGGTACTCGTCCAGAAGGGCGCCGTGTTCTCCGACCGGCCACCTGCCCTTGCCGTCTCCCGCATCTTCACCAGCAACCAGCACAACATCAACTCCGCACCGTACGGATCCACGTGGCGCACCCTCCGTCGCAACCTCACCAGCGAGATGCTCCACCCTAACCGCGTCAAATCGTTCTCCTCAGTCCGCCGCTGGGTCCTCGACGTCCTCGTCAACCGCCTCAAGTCCGATTCCGAAGCCAGAGACTCCGTCAGAGTCATCGATCATTTCCACTACGCCATGTTCTGCTTGCTCGTCTTCATGTGCTTCGGCGAGAAGTTGGACGAAAAGCAAGTCAAGGACGTGGAGCGTGTTCAGCGAGCGCTGCTTCTTTCGGGTGTTAGATTCAACGTCCTCAATTTCTGGGAACCGATTACTCGGATTCTCTTCTGGAAACGGTGGCAGGAGCTCTTCAGGCTTATGAAGGAGCAGAGCGATGTGTTGATTCCGCTAATTAGGGCTAGAAAGTCAATGAAGGAATCCCGTAGTGGCGGTGGTGGGGGCGGTGATGGTAGTGATATCGTTTCGTATGTGGATACTCTGTTGGATTTAGAGTTGCCGGAGGAGAAGCGGAAATTGAACGACGAAGAACTGGTGACAGTATGTTCGGAGTTCTTGAGCGCCGGCACAGACACTACGGCCACAGCGTTGCAATGGATTATGGCGAATGTGGTGAAGTACCCGCACGTTCAGCAAAGACTCCTAGAGGAGATTAGGGAGGTGAAGGGTCACGGTGATGACGGTGGAAGTAAAGAGGAGGTGAAAGAAGAAGAGCTGCAGAGGATGCCGTACTTGAAGGCCGTGGTGTTGGAAGGGCTGCGCCGCCATCCTCCTGGGCACTTTGTTTTGCCACATACTGTGACAGAGGATGTTGCCTTGAATGGTTACTTGATACCGAAGAAAGGGTCGGTGAATTTCATGGTGGCGCAGATAGGTTGGGACCCTGAGGTTTGGGAAGATCCGATGGAGTTCAAGCCGGAGAGGTTTTTGGAGAAAGGGAAGGAAGAAGGTGTTCCTTTCGATATCACCGGGAACAAGGAGATCAAGATGATGCCATTCGGAGCAGGGAGGAGGATCTGCCCTGGTCTTAACCTAGCAATGCTCCATTTGGAGTACTTTGTAGCTAATTTGGTCTGGAATTTGGATTGGAAGGTGCCAGAAGGAGGAAGTGTGGATTTGACGGAGAAGCAGGAGTTTACTATTGTCATGAAGAATCCATTGCATGCTCATATTACTCCTAGAATCTAA 1557 0.5292 METWFFLVVSACVCLLIRAIILNLTTTTNGPRLPPGPPYIPVVTTVSWLVKSFSQIEPVLVGLRAKYGPIITLRITSRPAIFVADRSFAHQVLVQKGAVFSDRPPALAVSRIFTSNQHNINSAPYGSTWRTLRRNLTSEMLHPNRVKSFSSVRRWVLDVLVNRLKSDSEARDSVRVIDHFHYAMFCLLVFMCFGEKLDEKQVKDVERVQRALLLSGVRFNVLNFWEPITRILFWKRWQELFRLMKEQSDVLIPLIRARKSMKESRSGGGGGGDGSDIVSYVDTLLDLELPEEKRKLNDEELVTVCSEFLSAGTDTTATALQWIMANVVKYPHVQQRLLEEIREVKGHGDDGGSKEEVKEEELQRMPYLKAVVLEGLRRHPPGHFVLPHTVTEDVALNGYLIPKKGSVNFMVAQIGWDPEVWEDPMEFKPERFLEKGKEEGVPFDITGNKEIKMMPFGAGRRICPGLNLAMLHLEYFVANLVWNLDWKVPEGGSVDLTEKQEFTIVMKNPLHAHITPRI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183491g00001 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Stsc183491g00001 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 510 - -
Stsc183491g00001 518 CDD CYP77_89 66 511 - -
Stsc183491g00001 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 SUPERFAMILY Cytochrome P450 34 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 FunFam Cytochrome P450 family protein 27 518 - -
Stsc183491g00001 518 Pfam Cytochrome P450 34 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183491g00001 518 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183491g00001 Stsc-Chr183491 2952 4508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183491g00001 1 517 Cytochrome P450 AT1G64940 56.923 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183491g00001 K24184 - gmx:100795683 721.465