Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183481g00001 ATGTTCAGGACACAAAACGACACCGTCATAGACGCATCTCCGTCAAACGACGATGCAGCAGCGTCATCAAACAGCGTCGTTTTGTTCGGCAAATACGAAATTCTGAAACTGCTTGGAGTAGGCGCGTTGGGAAAAGTGTACCACGCGCGGCGCGTTGATACCGGTGAGAGCGTGGCCGTTAAGGCCGTTAGCAAGCGCCATCTCAACGGTAAAGACGGTTACGCTTACGCGGCGCAAATCGAGCGCGAAATTTCTATCATGCGCCGGATGCGCCACCCGCACACCGTCAGGCTCTTTGAGGTACTTGCCACGAAGGCCAAGATTTACTACGTCATGGAGTACGCCGGCGGCGGCGAGCTTCTCCGCCGTGTCTCCGCCGACGGAAGGATGACGGAGAATCTCGCCAGAAAATACTTCCAGCAAAAGATTTACCGAGGGCAGTTTCGGTATCCTAAGTGGGTCTCGAGTGAATTTAAGCGCTTGGTGTCCAGGTTGTTAGATAGGGATCCCGAGACGAGAATTACTATTGACGAGATTATGAAGGATCCGTGGTTTTGTCGGGGCGGGTATAAGTACCCGACCCGAGTGATGCCCGAATTGGATGAGGACCACATGATGGCGAAAGATTTGAACGCATTTGATTTGATTTCTTTCTCATCCGGGTTTGACATTTCGGGTTTGTTGACCCACTCGGAGTATTTGAATTGCGTGGAGCGGTTTGTGTCGAAAGAGAAGCCAGAAAAGATATTGGAGAGGGTGAAAGCGATGGTGGATAAAGTGGAGAGGGTGGTAGTGAGAAAAGACGAAAAGGCCTGTGAAGGAGTGAAGTTGGAGGGTTTAGATGGTAATTTTGTAATTGCTGTTAGGATTTATCGGTTAATGAATGAATTGGTGGTTATTGAGGTAAAAAGAAAAGAGAAGAAAGTGGGAGGTGGACAATTTTGGAGGACTCAGTTGAGACCTTTGCTTCTTGAATTGGCTCTTCTTCATGGAAATGCTTCCAAATAA 1008 0.4881 MFRTQNDTVIDASPSNDDAAASSNSVVLFGKYEILKLLGVGALGKVYHARRVDTGESVAVKAVSKRHLNGKDGYAYAAQIEREISIMRRMRHPHTVRLFEVLATKAKIYYVMEYAGGGELLRRVSADGRMTENLARKYFQQKIYRGQFRYPKWVSSEFKRLVSRLLDRDPETRITIDEIMKDPWFCRGGYKYPTRVMPELDEDHMMAKDLNAFDLISFSSGFDISGLLTHSEYLNCVERFVSKEKPEKILERVKAMVDKVERVVVRKDEKACEGVKLEGLDGNFVIAVRIYRLMNELVVIEVKRKEKKVGGGQFWRTQLRPLLLELALLHGNASK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183481g00001 335 Gene3D Transferase(Phosphotransferase) domain 1 24 141 - -
Stsc183481g00001 335 Gene3D Transferase(Phosphotransferase) domain 1 142 194 - -
Stsc183481g00001 335 CDD CIPK_C 211 318 - -
Stsc183481g00001 335 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 141 305 - -
Stsc183481g00001 335 SUPERFAMILY Protein kinase-like (PK-like) 24 196 IPR011009 -
Stsc183481g00001 335 FunFam Aurora kinase A 25 118 - -
Stsc183481g00001 335 Pfam NAF domain 209 266 IPR004041 GO:0007165
Stsc183481g00001 335 Gene3D Kinase associated domain 1, KA1 205 327 - -
Stsc183481g00001 335 Pfam Protein kinase domain 32 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc183481g00001 335 ProSiteProfiles Protein kinase domain profile. 32 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc183481g00001 335 ProSiteProfiles NAF domain profile. 205 229 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183481g00001 Stsc-Chr183481 2079 3429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183481g00001 141 327 CBL-interacting serine-threonine protein kinases AT2G30360 41.919 1.70e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc183481g00001 Pkinase 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183481g00001 - K12761 zju:107431021 157.147