Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183438g00002 ATGGCGGGAAAAGTTTCGAAGGCAGCATTCGATGCGAAGATGTGGAATCTCTTGAAGGAGTACAGCCAGGTGGTGGTGGTTACCTCCGATAACGTTGGTTCGAACCAAATCAACCGCATTCGGAGGAGTTTAAAGGGCGACTCCGTTGTCGTTATGGGGAAGAACTCCATGATGAAGCGCTCCTTCACTCTCCAAGCTGGAAACAATTCCTTCCTCAACCTTATCCCTCTTCTTAGGGGAAATATAGCGTTGATTTTCACCAAAGGAGATATGAAGGAGGTTAGCAACGAGGTTGCTAAATTGAAGGTTGTTGATCCTCTTCTCATGTGCTCCAAGTACTTATCATATGAATCGTATCGCAATTGTTCTTACATGCAATCTAATCTGGACAGCTGCCTTTGGGTCTCAAGTGTTGTAATCAGCAGTTGTCTCGTGATTCTGAACCTTTTCTTGTATGCTCAAAATTCATGCCTCTCCAGCATTGTTTAA 489 0.4438 MAGKVSKAAFDAKMWNLLKEYSQVVVVTSDNVGSNQINRIRRSLKGDSVVVMGKNSMMKRSFTLQAGNNSFLNLIPLLRGNIALIFTKGDMKEVSNEVAKLKVVDPLLMCSKYLSYESYRNCSYMQSNLDSCLWVSSVVISSCLVILNLFLYAQNSCLSSIV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183438g00002 162 Gene3D - 4 115 IPR043141 -
Stsc183438g00002 162 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 106 - -
Stsc183438g00002 162 SUPERFAMILY Ribosomal protein L10-like 7 99 IPR043141 -
Stsc183438g00002 162 Pfam Ribosomal protein L10 6 100 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183438g00002 Stsc-Chr183438 2518 4539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183438g00002 1 106 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 59.292 2.45e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183438g00002 K02941 - rcu:8270447 137.502