Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183361g00002 ATGAGTTGTTTTGGTGTGAGGGTGGCAGCACTATGGTGTGCAGTGGTGTTAATGCTGATTATTGGAGACTTACCATCGTCCACAGATGCACAGGCATCAGGACTAGATCCGTCATTTTACAAGAACACTTGTCCAAATGTCCATTCCATTGTTCGTGAAGTCATAAGGAATGTCTCCAAAACAGATCCTCGCATGCTTGCTAGCCTCATTAGGCTTCACTTCCATGACTGCTTTGTTCAAGGATGTGACGCATCACTTTTGTTGAACGACACAAAAACCATAGCTAGCGAGCAAAGTGCACCTCCCAATGCCAATTCAATCAGGGGTTTGGATGTTGTCAACAAGATCAAAACAGAGGTGGAAAAAGCTTGCCCTGGCGTTGTTTCATGTGCTGATATTCTTGCTCTTGGAGCTGAAATCTCCTCTGTTCTGGGTCAAGGTCCTGATTGGAAAGTTCCCTTAGGAAGAAGGGATAGTACAACAGCAAATAAAACCCTTGCTGGTATTAACCTTCCAGCTCCATCCTTTGACCTCCCAAGACTTATATCAGCCTTCAAAAACCAAGGACTCAATGTTACCGATCTAGTTGCACTTTCAGGTGCTCATACTTTTGGAAGAGCCCGGTGCCAATTCATAACTAATCGGCTATACAACTTTAGCAACACTGCGAAACCCGATCCAACTCTAAACACAACATACTTGCAACAACTGAGATCAATATGCCCTAGCAATGGAAACGGAAACACCCTAACGAATTTCGACCCGACCACACCTGACACATTTGACAAGAACTACTACTCCAATCTGCTGATCCGCAAGGGGTTGCTCCAGAGTGACCAAGAATTGTTCTCCACACCGGGTGCTGAAACAGCGAGCATTGTGAACAAGTTCAGCAGTGACCAGAATGCTTTCTTTGAGGCCTTCAAGGCTTCCATGATCAAGATGGGTAACGTTGGTGTGCTCACTGGTAACAAAGGAGAAATTAGAAAGCAATGTAACTTTGTTAACTCACAATCTGTTGAGCTTGGTCTTGGTGTCTATAATTCAGAAGATGGTATGGTTAGTTCATACTAG 1074 0.4432 MSCFGVRVAALWCAVVLMLIIGDLPSSTDAQASGLDPSFYKNTCPNVHSIVREVIRNVSKTDPRMLASLIRLHFHDCFVQGCDASLLLNDTKTIASEQSAPPNANSIRGLDVVNKIKTEVEKACPGVVSCADILALGAEISSVLGQGPDWKVPLGRRDSTTANKTLAGINLPAPSFDLPRLISAFKNQGLNVTDLVALSGAHTFGRARCQFITNRLYNFSNTAKPDPTLNTTYLQQLRSICPSNGNGNTLTNFDPTTPDTFDKNYYSNLLIRKGLLQSDQELFSTPGAETASIVNKFSSDQNAFFEAFKASMIKMGNVGVLTGNKGEIRKQCNFVNSQSVELGLGVYNSEDGMVSSY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183361g00002 357 Gene3D - 39 336 - -
Stsc183361g00002 357 FunFam Peroxidase 172 315 - -
Stsc183361g00002 357 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 Gene3D Peroxidase, domain 2 172 315 - -
Stsc183361g00002 357 SUPERFAMILY Heme-dependent peroxidases 35 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 CDD secretory_peroxidase 34 335 IPR033905 GO:0004601|GO:0042744
Stsc183361g00002 357 PANTHER PEROXIDASE 72-RELATED 34 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 ProSiteProfiles Plant heme peroxidase family profile. 34 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 FunFam Peroxidase 38 177 - -
Stsc183361g00002 357 Pfam Peroxidase 51 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc183361g00002 357 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00002 357 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183361g00002 Stsc-Chr183361 5281 7219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183361g00002 13 356 Peroxidase AT2G38380 54.493 1.65e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183361g00002 K00430 - gmx:100804829 502.671