Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183361g00001 ATGATGAGTTTTCTTAGTAGTTTCATGATAAAAGTGGTAGCCCTATGCTATGGTGTGTTTATGATTGGAGTGTTACCCTTATCCTCAGAAGCACAACTTGATCCATCTTTTTACAATAAAACATGTCCGAATGTTCATTCAATTGTACGTGAAGTCATAAACAATGTCTCCAAAACTGATCCACGCATGCCTGCTAGCCTCCTCAGGCTTCACTTCCATGACTGCTTTGTTCAAGGTTGTGATGGATCACTTTTATTGAACAACACTGCAACAATAGTAAGCGAACAACAAGCTCGACCAAATAACAACTCAATAAGAGGTTTGAATGTTGTGAATCAGATCAAAACCGCTGTGGAAAATGCTTGCCCTGGCATAGTTTCCTGTGCAGATATCCTTGCTCTTGGAGCTGAAATATCTACTGTTCTGGCTGGAGGTCCGGATTGGAAAGTTGAATTAGGGAGAAGAGATAGTTTAACAGCAAATATAACATTAGCACAAAACCTTCCAGGTCCTACCCTGACCTTGGATCAACTTAAAAAGCGCTTTTCTGATCAGGGCCTCAACACTACTGATCTTGTTGCACTCTCAGGTGCACATACATTTGGTAGAGCTCGATGTGTTTTATTCGTGGGACGGCTATACAACTTTAGCAACACTGGTAACCCTGATCCGACTCTCAATGCGACTTATCTACAAACATTGAGATCGGTATGCCCGAACGGCGGCCCGGGATCCAACGTAGCGAATTTGGACACTACAACACCAGACACATTCGACAAAAACTATTACTCGAATCTTCAGGTTCACAAGGGCTTGCTCCAGAGTGACCAAGAGTTGTTCTCAACTTCGGGTGCAGATACCATTAGCATTGTTAACAACTTCAGTGGTGACCAAAATGCTTTCTTTGAAGCCTTCAAGGCTTCAATGATCAAAATGGGTCAAATTGGTGTGCTGACTGGTTCCAAAGGCGAAATTCGGAAACAATGTAACTTTATTAACTCACAATCTGCTGAACTGGGTCTCTATAATGTGGCTTCCAAAGAATCATCAGAAAAAGATGGAGGAATGGTTAGCTCAATCTAA 1083 0.4201 MMSFLSSFMIKVVALCYGVFMIGVLPLSSEAQLDPSFYNKTCPNVHSIVREVINNVSKTDPRMPASLLRLHFHDCFVQGCDGSLLLNNTATIVSEQQARPNNNSIRGLNVVNQIKTAVENACPGIVSCADILALGAEISTVLAGGPDWKVELGRRDSLTANITLAQNLPGPTLTLDQLKKRFSDQGLNTTDLVALSGAHTFGRARCVLFVGRLYNFSNTGNPDPTLNATYLQTLRSVCPNGGPGSNVANLDTTTPDTFDKNYYSNLQVHKGLLQSDQELFSTSGADTISIVNNFSGDQNAFFEAFKASMIKMGQIGVLTGSKGEIRKQCNFINSQSAELGLYNVASKESSEKDGGMVSSI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183361g00001 360 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 SUPERFAMILY Heme-dependent peroxidases 32 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 FunFam Peroxidase 169 312 - -
Stsc183361g00001 360 Gene3D Peroxidase, domain 2 169 312 - -
Stsc183361g00001 360 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PANTHER PEROXIDASE 72-RELATED 30 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 CDD secretory_peroxidase 32 332 IPR033905 GO:0004601|GO:0042744
Stsc183361g00001 360 Pfam Peroxidase 49 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Stsc183361g00001 360 FunFam Peroxidase 36 181 - -
Stsc183361g00001 360 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183361g00001 360 Gene3D - 37 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183361g00001 Stsc-Chr183361 1494 4200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183361g00001 16 333 Peroxidase AT5G06720 58.154 3.55e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183361g00001 K00430 - gmx:112997600 535.798