Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183292g00001 ATGAAAGAAACCTTTGAGACTGTTGCATCGTCTCCAGGACTCTCCCTCTTCAACGACTGCAGTATGAACTTGGCGTGTGAAGAGTTACCATCCGATGTCCTAACACTAGGTAATCTAAGTGTAGGTTCTGGTCAGGAATATGTCCTTCCGGAAGGTTTTCCGGATGTGATGTTGCCTCCAATCAAGACCTCCATATATAGCGGCTTTCTGCCAGGAACTGCATTCTTTGATTATGATCGTATCGTGCAAGAAATGGGAGAGATAATGGAAGTCGATGACTGTCGTAGGGGAATGGAAAGGTTTGCTCTATCCCCTGCAACAAGTGGCAGCGGTGACGATCCACCGCAGAGACAAGTCCCATGGAGTGCGGAGATTGGTAAGTCAGTCATATATTCATGCGTAAAGGTCCTCACAGGCTTCCAGGCACGTCACTATTCACTGTTGCTTCCGGCCAGCTTTGCGAAAAGAGCCTTTCCATCGAAGCTATCGTATGTGAATGTCTATATGGCAAGGGGAAGAGGTGTGATCATGAGGTTGCGTTGGAAGGGACGACGTTCGAATGAGGTATTTCTCATAAGGGGTTGGAAGGATTTCACAAGGGCAAACAATCTAAGGCATGGCAATGTTATCAAGTTTAGCGTCCTATCAACGGACGAAACATCGATGTTTATCAGAGTAGTTAGTAATTAG 690 0.4638 MKETFETVASSPGLSLFNDCSMNLACEELPSDVLTLGNLSVGSGQEYVLPEGFPDVMLPPIKTSIYSGFLPGTAFFDYDRIVQEMGEIMEVDDCRRGMERFALSPATSGSGDDPPQRQVPWSAEIGKSVIYSCVKVLTGFQARHYSLLLPASFAKRAFPSKLSYVNVYMARGRGVIMRLRWKGRRSNEVFLIRGWKDFTRANNLRHGNVIKFSVLSTDETSMFIRVVSN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183292g00001 229 ProSiteProfiles B3 DNA-binding domain profile. 132 229 IPR003340 GO:0003677
Stsc183292g00001 229 SUPERFAMILY DNA-binding pseudobarrel domain 131 226 IPR015300 -
Stsc183292g00001 229 SMART B3_2 133 229 IPR003340 GO:0003677
Stsc183292g00001 229 Pfam B3 DNA binding domain 144 228 IPR003340 GO:0003677
Stsc183292g00001 229 CDD B3_DNA 132 212 IPR003340 GO:0003677
Stsc183292g00001 229 Gene3D - 119 229 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183292g00001 Stsc-Chr183292 2969 3754 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc183292g00001 B3 2.6e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183292g00001 - K15504 adu:127740618 98.5969