Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183188g00003 ATGCCATCAAAGTCAACCAACAACTTTGACCATAAACTAGTAACTGGGTGGGTAGCCTTTGGCTTCTGCAACCAAGAAAAGGGAAAGAAGATTATTGTGTACGAGTACATGGCCAATGGATCACTGAGTGATTACTTGAGTAATAGGAACAAGGAACCACTTTCATGGAACAAGAGACTAGACATCTGCATCGGGGTAGCACGTGCTCTACACTACCTCCAAGCGTTGTATCGGAGCACTCTCTACATTGAAGAGCATGTCCCTACTCTTGAGAAGATAATGGATCCGGTTCTGAAAGGAAAGATTGCTTCTGAGTGTTGGCAAGTATTCACTAGTGTGATACCAAGTTGCTTGAGGATTGAAGCAGAGGAACGATCATCAATGGGTGAAGTAGAGATATGCTCTCTCATTGCAGCAACAAGCTGA 426 0.439 MPSKSTNNFDHKLVTGWVAFGFCNQEKGKKIIVYEYMANGSLSDYLSNRNKEPLSWNKRLDICIGVARALHYLQALYRSTLYIEEHVPTLEKIMDPVLKGKIASECWQVFTSVIPSCLRIEAEERSSMGEVEICSLIAATS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183188g00003 141 PANTHER OS07G0166700 PROTEIN 20 75 IPR045272 GO:0004714|GO:0006468
Stsc183188g00003 141 Gene3D Transferase(Phosphotransferase) domain 1 7 136 - -
Stsc183188g00003 141 Pfam Protein tyrosine and serine/threonine kinase 20 74 IPR001245 GO:0004672|GO:0006468
Stsc183188g00003 141 SUPERFAMILY Protein kinase-like (PK-like) 21 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183188g00003 Stsc-Chr183188 5694 6313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183188g00003 21 103 Receptor kinase-like Gene Family AT2G21480 42.169 1.95e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc183188g00003 PK_Tyr_Ser-Thr 1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183188g00003 - - aip:107637356 120.168