Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183188g00002 ATGGAAAACAAGTTGAATCATGATGACACAACAGTGAAGGTGATAGAGCAATATCAAGTAGGTCCTCCACCAGGTTCTGTTCCTACTCCAACCTCAATTTCTCTTTCTTTCTTTGATGTTCCTTATTTATGCATGCCTATAACTTGCAAACGCATTTTCTTCTATGAATTCCCTTACCCCAAACAACACTTGTTACAAAAAGTGCTTCCAAATCTGAAACAATCACTTTCACTCACACTCAAACACTTCTTCCCTTTCTCTTCAAAAATAGTATTCCCTCCAAAGCCACAAACCCCTCACATTCTCTACTCAGAAGGTGACGCCCTCACTTTCATAGTTGCTGAGTCCACTGCAACGAATCTCGACAACCTTGTATCTGACACAACAAAAGATGTCATTTGCTTCCACTCTTTTGTTCCAATGTTGCCTTCTCCACGTGCCTTAGAGGATGGCACCTTGTTGATACCTCCCATGGCTATTCAACTCACTATCTTCCCCAACTCTGCCTTCGCCATATGCATCAATTTCAGTCATGTGGTTGTAGATGGGAAGGGATTACATCACTTTATGAAGTTTTGGGCCTCAGTTTGTGGCTCTAAAGAGAAAATTATCGCTCTGCCTCTTCCATTCCTTGATAGAGACATGATTGATGACCCGAATGGGCTCAAGCCTATGTTCTTAGAAACAGTGTGGAATTCTCCAAGAGAAAGGTTCATGAGCCTTGGCCATAATGTTCCCAGTGACGATGTTCGCCTCACGTTTTTGTTGAGGCGCGAACATGTTGATAATTTGAAGAATTATGTGTCTACTGAGTGCCAAAGACATGGTATAGGAACATTACATTTGTCAACCTTTGTTGTCACATGTTCTCTGTTTTGGGTTTGTAAGGCAAAATTAGAAGATATCAAATTTAATGATGATGAAGAACTATACCTATGTTGTTGGTTAGATTGTCGTTCTCGTGACATTGGTGGATTGGAAATTCCCTCAACGTACTTTGGAAATTGCTTGGTTAATGGCATGGCAGCAATCAAGAAGAGCGAGCTAGTGGGGCAAAATGGTATTTTTGAAGCAGCTGTTGCTATTGGGAGCAAAGTTAGAGAAATGCAATGTGAACCTTATAAATGTGCTGAAACATTGAAGTCAATTTTTAGTGAAGTTGCTAGAGTTGGACACCGTATGTTGCGGATTGCAGCTTCACCAAAGTTGGATGTGTATGAGACTGATTTTGGGTGGGGAAAACCCAAATTGAGTGAAGTAGTTCACATACATTCTCAGTTGCTCTCCCTCTCTGATTGCAGAGACAAAGAAGGTGGAGTAATTGAAGTTGGTGTAGCACTTGAGAGGACTCAAATCCATAAATTCAACACCATTTTAGAAGAGGAGCTTGCAAAAATTGTAGCTTATGAATAA 1413 0.4069 MENKLNHDDTTVKVIEQYQVGPPPGSVPTPTSISLSFFDVPYLCMPITCKRIFFYEFPYPKQHLLQKVLPNLKQSLSLTLKHFFPFSSKIVFPPKPQTPHILYSEGDALTFIVAESTATNLDNLVSDTTKDVICFHSFVPMLPSPRALEDGTLLIPPMAIQLTIFPNSAFAICINFSHVVVDGKGLHHFMKFWASVCGSKEKIIALPLPFLDRDMIDDPNGLKPMFLETVWNSPRERFMSLGHNVPSDDVRLTFLLRREHVDNLKNYVSTECQRHGIGTLHLSTFVVTCSLFWVCKAKLEDIKFNDDEELYLCCWLDCRSRDIGGLEIPSTYFGNCLVNGMAAIKKSELVGQNGIFEAAVAIGSKVREMQCEPYKCAETLKSIFSEVARVGHRMLRIAASPKLDVYETDFGWGKPKLSEVVHIHSQLLSLSDCRDKEGGVIEVGVALERTQIHKFNTILEEELAKIVAYE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183188g00002 470 Gene3D - 245 466 IPR023213 -
Stsc183188g00002 470 Pfam Transferase family 14 458 - -
Stsc183188g00002 470 PANTHER - 12 464 - -
Stsc183188g00002 470 Gene3D - 11 241 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183188g00002 Stsc-Chr183188 3907 5500 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183188g00002 72 461 Monolignol Biosynthesis Gene Families AT5G48930 21.040 8.90e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183188g00002 - - ahf:112729058 517.694