Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183175g00001 ATGGCTTTGAGAAAATCTACTAGGCTTCATCAAGCACCACTTCTCAAGCAAATTCTCAAGAGATGCTCAAGTTTAGGGAAGAATAAGCAAGGCTTTGATAATGATGTTCCAAAGGGTCACTTTGTTGTGTATGTTGGAGAGAATAGAAGCAGGTACATTGTCCCAATTTCAATTCTAAGGTGCCCTAGCTTCCAAACATTGCTCCATCAAGCTGAAGAAGAGTTTGGCTTTGATCATGAAGGGGGTCTCACTATCCCTTGTGATGAGGATGTTTTTGAGTCTCTTCTTACATCTTCCATTTAG 303 0.4059 MALRKSTRLHQAPLLKQILKRCSSLGKNKQGFDNDVPKGHFVVYVGENRSRYIVPISILRCPSFQTLLHQAEEEFGFDHEGGLTIPCDEDVFESLLTSSI 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183175g00001 100 Pfam Auxin responsive protein 21 97 IPR003676 GO:0009733
Stsc183175g00001 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 27 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183175g00001 Stsc-Chr183175 6364 6666 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183175g00001 14 97 Calmodulin-binding Proteins AT4G34750 46.429 3.81e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183175g00001 K14488 - gmx:100778552 149.828