Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183163g00001 ATGCAAGAAGCACAAATTCTTCCAGCTGTGGCAGCTAGTGTGTATGGTGACAACAATACCTTCTATAGATGTGGTTTCATTGGTTACCAAGACACCTTGTTTGATGGATCAAGAAGACATTATTACAAAGAGTGTTACATCCAGGGCGAAGTCGATTTCATTTTTAGTAATGCCCACTCGTTTTATGAGAAATGCACCATAAATGCTACAGCAAGGGACATCAATCTTCCAGGGTTTGTAACAGCACATGGACGAAGTAAAGATACAGAACCTGATGGTGGATTTGTATTTAACGGAGGTGAAATTGTTGGAACTGGGAAAGTGAATTTGGGAAGAGCATGGGGTCTTTGGCTAGAGTTATTTTTCATGGAACTTATTTTGGATCATTAA 390 0.3949 MQEAQILPAVAASVYGDNNTFYRCGFIGYQDTLFDGSRRHYYKECYIQGEVDFIFSNAHSFYEKCTINATARDINLPGFVTAHGRSKDTEPDGGFVFNGGEIVGTGKVNLGRAWGLWLELFFMELILDH 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183163g00001 129 Pfam Pectinesterase 8 125 IPR000070 GO:0030599|GO:0042545
Stsc183163g00001 129 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 122 - -
Stsc183163g00001 129 Gene3D - 2 124 IPR012334 -
Stsc183163g00001 129 SUPERFAMILY Pectin lyase-like 8 116 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183163g00001 Stsc-Chr183163 9463 10274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183163g00001 9 115 Carbohydrate Esterase AT5G55590 51.402 7.27e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183163g00001 - - lang:109328531 154.066