Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183149g00001 ATGAAGACAACATCATTCCTTGTAGCTTGTGTGTTAGTCTCTTGTTTCCTTGGGGCTTGCCATGGAGGCGACCTCAGGAAAAATTTCTACAGAAAATCATGTCCTCAAGCTGAAACTATTGTTAAGACCAAAATCCAGGAACACGTTATTACAAGGCCTGAATTGCCAGCCAAATTGCTTAGGATGCATTTTCATGATTGTTTCGTCAGGGGTTGTGACGGGTCGATTTTATTGGACACAACTCCCACAAACACCGCGGAGAAAGATGCCTTTCCTAATTTATCATTGTCCGGATTTGATGTGATTGATGATATAAAATCAGCAGTTGAAGCAAAATGTTCTGGAGTTGTATCTTGTGCTGACATTCTAGCATTGGCAGCTAGAGATGCTGTTTCTGTCCGATTTAATAATGTGCCTATGTGGGAAGTTCTTACTGGTAGAAGAGATGGAAGAGTTTCCACAGACACTGATGCCTTGAACAATCTTCCAGCACCTTTCTTCAACTTCACCGACCTCAAACAAAGCTTTGAAAGCAAAAAACTCACCGTGCATGACCTCGTTGTATTATCAGGTGCACACACAATTGGAGTAGGGCATTGCAGTTCCTTCAGTAATAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTTCATTGAACCCAACATATGCTAATTTCTTGAAGACAAAATGCCAAGGACTGAGTGACACAACCACAACGGTGGAGATGGATCCAAATGGGTCTGGAAAATTTGACAGTGACTATTATTCCATACTAGTACAGAACAAGGGTCTGTTCCAATCAGATGCTGCACTTCTAACAACAAAGATATCAAGAAACATTGTCATTGAATTGCTTAACCAAAACAAGTTCTTCACTGAGTTTGCACAATCAATGAAGAGAATGGGAGCCATTGAAGTCCTCACTGGCTCTGCTGGCGAAATTAGGCGCAAGTGTTCTGCTATCAACTAA 975 0.4144 MKTTSFLVACVLVSCFLGACHGGDLRKNFYRKSCPQAETIVKTKIQEHVITRPELPAKLLRMHFHDCFVRGCDGSILLDTTPTNTAEKDAFPNLSLSGFDVIDDIKSAVEAKCSGVVSCADILALAARDAVSVRFNNVPMWEVLTGRRDGRVSTDTDALNNLPAPFFNFTDLKQSFESKKLTVHDLVVLSGAHTIGVGHCSSFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNGSGKFDSDYYSILVQNKGLFQSDAALLTTKISRNIVIELLNQNKFFTEFAQSMKRMGAIEVLTGSAGEIRRKCSAIN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183149g00001 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Stsc183149g00001 324 Gene3D - 28 324 - -
Stsc183149g00001 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Stsc183149g00001 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 Gene3D Peroxidase, domain 2 163 303 - -
Stsc183149g00001 324 FunFam Peroxidase 163 303 - -
Stsc183149g00001 324 FunFam Peroxidase 28 166 - -
Stsc183149g00001 324 PANTHER PEROXIDASE 25-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc183149g00001 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183149g00001 Stsc-Chr183149 3665 5367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183149g00001 7 324 Peroxidase AT1G05260 53.538 7.36e-116 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183149g00001 K00430 - gmx:100775970 543.888