Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183119g00001 ATGAAAGCAGCTCCGCTTCTTCTTCTTCTATGCTTCTTTCTCGTTTCTTTGTTAGTTTACGCAAAGAAATCGGGCGATGTTACAGCTTTGCAGATCGGCGTGAAGCACAAGCCAGCATCATGTGACGTCCAAGCGCACAAAGGAGATAGAGTCAAAGTACATTATCGGGGGAAACTCACTGATGGAACAGTTTTTGATTCTAGCTTTGAAAGAGATAATCCAATTGAATTTGAGCTTGGTACTGGGCAAGTGATCAAAGGTT 262 0.4275 MKAAPLLLLLCFFLVSLLVYAKKSGDVTALQIGVKHKPASCDVQAHKGDRVKVHYRGKLTDGTVFDSSFERDNPIEFELGTGQVIKG 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183119g00001 87 PANTHER PEPTIDYLPROLYL ISOMERASE 9 87 IPR044609 GO:0000413|GO:0003755|GO:0061077
Stsc183119g00001 87 Gene3D - 17 87 IPR046357 GO:0003755
Stsc183119g00001 87 SUPERFAMILY FKBP-like 30 87 - -
Stsc183119g00001 87 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 42 87 IPR001179 GO:0003755
Stsc183119g00001 87 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 48 87 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183119g00001 Stsc-Chr183119 7755 9836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183119g00001 23 87 Calmodulin-binding Proteins AT3G25230 47.059 1.78e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183119g00001 K09569 - gmx:100305479 142.124