Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc183053g00001 ATGAATCTGCACCACATCACAAGTAAGAACTTTGTCAACTATGGCAAAGGTTCTGAGTTCCATGAAATTTTTGAAATTTTTGGAGATGGAATCTTTAATTCTGATTCACACAATTGGAAGTACCAGAGACACTTAATACAATCAGTGTTTAAGAAAAACATTTTTGGGAACTTTGTTAGAAAAGTCATTCATAAGAAAGTAGATAATTATTTACTTCCACTTTTGAATGAGGTTTCGGAGTCAAGAACTATCGTGGACTTGCAAGACATCTTTCATAGATTCACTTTTGATATTATGTGCTCCATGGTTTTAGCGTTTGATCCCAATTGCCTTCCCAACAAGCTCACTCAATTCCCTGAGGTTGCTGTTGAGGAAGCTTTCAACAAAATGGGGGATGCAATTGTTTATAGACACCTCGTCCCGAGATGGTTATGGAAGCTGCAGAAATGGTTCCAAATTGGACATGAAAGGGACTCTATTTCTATCCAACAAATTATGGATCAATTCTTCCGTGATCGAATATCATCCCCTGGAGAAGAGAAAAGCAGATTCAACCACACCAAAGATGATGAATCAAACTTTAACATGATAAAAGCTCTTGTGGAGGAAGGTGGAATGGAACAACAAGTAGATTACAAGTTTCTAAGAGACACTGCACTGAATCTCTTAGCAGCGGGAAGGGACACAATTAGTGCAGGTCTATGTTGGTTTTTATGGCTTGTTTCAACTCACCCTAATGTTGAAACCAAGATCCTTGAAGAAATCAGAGAAAAGTTTAAAACAAATGAAGAAAATTGGCTCATTTCAGAGGTGGAAGACCTTGACAAGCTAATTTACTTGCATGGAGCTATATGTGAAGCACTGAGGCTTTTCCCTCCAGTGCCATTTGAGCACAAATGTGCCATCAAATCTGATATACTTCCAAGTGGAGATCATGTTGATGCAAATACTGTGGTGTATTACTCCATATATTCAATGGGAAGGATGGAACAAATATGGGGAAATGATTGCTTGGAATTTAAGCCTGAAAGGTGGATTTCAGAAAAAGGAATCAATATACAGGTACCATCATACAAGTTCATGGCTTTTAATGCTGGTCCCAGAAGTTGTTTGGGAAAAAATTTAAGCTTCATCCAGTTGAAGATCGTTGCCATTGCTTTGTTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGCATTCAGTGTGCCCAACTGTTTCAGTTGTGCTACACATGAAGCACGGGCTGCAAGTCAAGATTACTAAAAGAGGCAATTGA 1275 0.3867 MNLHHITSKNFVNYGKGSEFHEIFEIFGDGIFNSDSHNWKYQRHLIQSVFKKNIFGNFVRKVIHKKVDNYLLPLLNEVSESRTIVDLQDIFHRFTFDIMCSMVLAFDPNCLPNKLTQFPEVAVEEAFNKMGDAIVYRHLVPRWLWKLQKWFQIGHERDSISIQQIMDQFFRDRISSPGEEKSRFNHTKDDESNFNMIKALVEEGGMEQQVDYKFLRDTALNLLAAGRDTISAGLCWFLWLVSTHPNVETKILEEIREKFKTNEENWLISEVEDLDKLIYLHGAICEALRLFPPVPFEHKCAIKSDILPSGDHVDANTVVYYSIYSMGRMEQIWGNDCLEFKPERWISEKGINIQVPSYKFMAFNAGPRSCLGKNLSFIQLKIVAIALLWNFHFQVVEGHSVCPTVSVVLHMKHGLQVKITKRGN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc183053g00001 424 PANTHER CYTOCHROME P450 2 417 - -
Stsc183053g00001 424 CDD CYP86A 2 415 - -
Stsc183053g00001 424 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS P450 superfamily signature 225 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 Gene3D Cytochrome P450 2 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS E-class P450 group I signature 214 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 PRINTS E-class P450 group I signature 234 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Stsc183053g00001 424 Pfam Cytochrome P450 9 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc183053g00001 424 SUPERFAMILY Cytochrome P450 4 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc183053g00001 Stsc-Chr183053 5997 7271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc183053g00001 2 424 Cytochrome P450 AT2G23180 43.155 5.97e-132 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc183053g00001 - - ahf:112735737 516.538